RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 OR10A7Q8NGE5 316 aa11.92□□□□□ -0.5
BRCA1-223ENST00000494123 OR13D1Q8NGV5 346 aa11.92□□□□□ -0.5
BRCA1-223ENST00000494123 SUCNR1Q9BXA5 334 aa11.92□□□□□ -0.5
BRCA1-223ENST00000494123 TMEM133Q9H2Q1 129 aa11.92□□□□□ -0.5
BRCA1-223ENST00000494123 LINC00574Q9H8X3 128 aa11.92□□□□□ -0.5
BRCA1-223ENST00000494123 ZNF230Q9UIE0 474 aaPredicted RBP11.92□□□□□ -0.5
BRCA1-223ENST00000494123 SONP18583 2426 aaKnown RBP11.92□□□□□ -0.5
BRCA1-223ENST00000494123 RNASEK-C17orf49H0YIS7 233 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 SDCBPO00560 298 aaPredicted RBP11.91□□□□□ -0.5
BRCA1-223ENST00000494123 MMP23AO75900 390 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 FPR2P25090 351 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 PRSS3P35030 304 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 GDNFP39905 211 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 KIR2DS4P43632 304 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 HLA-DRB3P79483 266 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 KIR2DS1Q14954 304 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 HMGN3Q15651 99 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 CNPY1Q3B7I2 92 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 Q6ZPA2 131 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 OR1L1Q8NH94 360 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 C15orf40Q8WUR7 153 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 IL1F10Q8WWZ1 152 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 MAFIPQ8WZ33 124 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 TNFRSF14Q92956 283 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 GALMQ96C23 342 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 KIRREL1Q96J84 757 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 ST6GALNAC5Q9BVH7 336 aa11.91□□□□□ -0.5
BRCA1-223ENST00000494123 CENPVL3A0A0U1RRI6 287 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 FAM172BPA6NC97 362 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 TRDCB7Z8K6 153 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 SSX5O60225 188 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 HLA-DQB1P01920 261 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 IGHV4-38-2P0DP08 117 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 TNFSF8P32971 234 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 IL18Q14116 193 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 TMEM30BQ3MIR4 351 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 CHRFAM7AQ494W8 412 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 KLF17Q5JT82 389 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-223ENST00000494123 PNKDQ8N490 385 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 GCDHQ92947 438 aaPredicted RBP11.9□□□□□ -0.5
BRCA1-223ENST00000494123 ZNF286AQ9HBT8 521 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 IFT46Q9NQC8 304 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 GNG12Q9UBI6 72 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 NUP50Q9UKX7 468 aa11.9□□□□□ -0.5
BRCA1-223ENST00000494123 IGHV3-43A0A0B4J1X8 118 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 IGHV1-69DA0A0B4J2H0 117 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 A0A1W2PRD5 423 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 A0A1W2PRF3 423 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 A0A1W2PRM7 423 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 MEIS3P1A6NDR6 274 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 F2RL2O00254 374 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 IGHV1-69P01742 117 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 IGHV3-43DP0DP04 118 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 CBX5P45973 191 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 UBE2E1P51965 193 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 CLEC7AQ9BXN2 247 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 RABL2AQ9UBK7 228 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-223ENST00000494123 RABL2BQ9UNT1 228 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 NSD1Q96L73 2696 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-223ENST00000494123 IGHV2-26A0A0B4J1V2 119 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 FABP12A6NFH5 140 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 TOR1AO14656 332 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 FABP7O15540 132 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 TPPPO94811 219 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 SCTP09683 121 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 SRD5A1P18405 259 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 SCGB2A2Q13296 93 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 SRSF7Q16629 238 aaKnown RBP eCLIP11.89□□□□□ -0.51
BRCA1-223ENST00000494123 RUSC1-AS1Q66K80 236 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 PYHIN1Q6K0P9 492 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 FAM131AQ6UXB0 335 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 BRD3OSQ6XYD6 125 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 C5orf24Q7Z6I8 188 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 ABHD12Q8N2K0 398 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 OR52M1Q8NGK5 317 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 OR4A4PQ8NGN8 299 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 OCSTAMPQ9BR26 566 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 MS4A7Q9GZW8 240 aaPredicted RBP11.89□□□□□ -0.51
BRCA1-223ENST00000494123 SCPEP1Q9HB40 452 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 OR2S2Q9NQN1 319 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 GFOD1Q9NXC2 390 aa11.89□□□□□ -0.51
BRCA1-223ENST00000494123 TEP1Q99973 2627 aaKnown RBP11.89□□□□□ -0.51
BRCA1-223ENST00000494123 A0A087X0M5 115 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 A0A1B0GX30 115 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 MEIOCA2RUB1 952 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 HSPA12AO43301 675 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 FSHBP01225 129 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 IGHV3-7P01780 117 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 ARG1P05089 322 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 LPLP06858 475 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 LGALS4P56470 323 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 BPIFB3P59826 476 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 HTD2P86397 168 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 RNASE12Q5GAN4 147 aaKnown RBP11.88□□□□□ -0.51
BRCA1-223ENST00000494123 STEAP3Q658P3 488 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 HCP5Q6MZN7 132 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 Q6ZS49 121 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 OR10V1Q8NGI7 309 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 OR6Q1Q8NGQ2 317 aa11.88□□□□□ -0.51
BRCA1-223ENST00000494123 LEAP2Q969E1 77 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms