RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 DYRK2Q92630 601 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 NEIL1Q96FI4 390 aaPredicted RBP10.01□□□□□ -0.81
UPF3A-210ENST00000493727 CMSS1Q9BQ75 279 aaKnown RBP10.01□□□□□ -0.81
UPF3A-210ENST00000493727 SULT4A1Q9BR01 284 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 WDR12Q9GZL7 423 aaKnown RBP10.01□□□□□ -0.81
UPF3A-210ENST00000493727 CDIP1Q9H305 208 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 AUNIPQ9H7T9 357 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 DUX4Q9UBX2 424 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 SLC25A10Q9UBX3 287 aaPredicted RBP10.01□□□□□ -0.81
UPF3A-210ENST00000493727 PLA2G2DQ9UNK4 145 aa10.01□□□□□ -0.81
UPF3A-210ENST00000493727 NOTCH1P46531 2555 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 TRBV23-1A0A0A0MS06 115 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 TMEM30CPA0ZSE6 113 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 FUOMA2VDF0 154 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 FSHBP01225 129 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 TK1P04183 234 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 SELLP14151 372 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 AMY2BP19961 511 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 LMO1P25800 156 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 PRSS3P35030 304 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 ETV6P41212 452 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 OR3A1P47881 315 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 EDDM3BP56851 147 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 LCN2P80188 198 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 ZNF45Q02386 682 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 LSAMPQ13449 338 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 ZNF846Q147U1 533 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 PNLIPRP3Q17RR3 467 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 ZNF260Q3ZCT1 412 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 OLFML2AQ68BL7 652 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 C17orf107Q6ZR85 190 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 OR8H2Q8N162 312 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 LILRB2Q8N423 598 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 OR4S1Q8NGB4 309 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 OR5D13Q8NGL4 314 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 SLC6A7Q99884 636 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 FAM234AQ9H0X4 552 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 PATZ1Q9HBE1 687 aaKnown RBP10□□□□□ -0.81
UPF3A-210ENST00000493727 AKIP1Q9NQ31 210 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 KAAG1Q9UBP8 84 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 AK3Q9UIJ7 227 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 MAB21L2Q9Y586 359 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 V9GYH0 126 aa10□□□□□ -0.81
UPF3A-210ENST00000493727 WNK1Q9H4A3 2382 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 A8MXK9 166 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 K7N7A8 449 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 DVL1O14640 695 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 MGST3O14880 152 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 ZNF737O75373 536 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 TPPPO94811 219 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 PTHLHP12272 177 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 PTBP1P26599 531 aaKnown RBP eCLIP9.99□□□□□ -0.81
UPF3A-210ENST00000493727 MRPS10P82664 201 aaKnown RBP9.99□□□□□ -0.81
UPF3A-210ENST00000493727 ESCO2Q56NI9 601 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 AWAT1Q58HT5 328 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 KRBOX4Q5JUW0 171 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 HACD4Q5VWC8 232 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 TRAPPC6BQ86SZ2 158 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 NUDCD2Q8WVJ2 157 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 H1FXQ92522 213 aaKnown RBP9.99□□□□□ -0.81
UPF3A-210ENST00000493727 C12orf4Q9NQ89 552 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 IFT46Q9NQC8 304 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.99□□□□□ -0.81
UPF3A-210ENST00000493727 CTSZQ9UBR2 303 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 CLN8Q9UBY8 286 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 OPN4Q9UHM6 478 aa9.99□□□□□ -0.81
UPF3A-210ENST00000493727 ELF5Q9UKW6 265 aaPredicted RBP9.99□□□□□ -0.81
UPF3A-210ENST00000493727 VWFP04275 2813 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 MEIKINA0A087WXM9 373 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 MEIS3P1A6NDR6 274 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 TNFRSF13BO14836 293 aaPredicted RBP9.98□□□□□ -0.81
UPF3A-210ENST00000493727 CA11O75493 328 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 HLA-DQB1P01920 261 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 CSN2P05814 226 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 LPLP06858 475 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 NPY4RP50391 375 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 P2RX3P56373 397 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 GNB2P62879 340 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 UBA52P62987 128 aaKnown RBP9.98□□□□□ -0.81
UPF3A-210ENST00000493727 AESQ08117 197 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 FOXL1Q12952 345 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 PDLIM3Q53GG5 364 aaPredicted RBP9.98□□□□□ -0.81
UPF3A-210ENST00000493727 PLPPR1Q8TBJ4 325 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 FCAMRQ8WWV6 532 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 CYYR1Q96J86 154 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 ABHD1Q96SE0 405 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 HDHD3Q9BSH5 251 aaPredicted RBP9.98□□□□□ -0.81
UPF3A-210ENST00000493727 RIMS4Q9H426 269 aaPredicted RBP9.98□□□□□ -0.81
UPF3A-210ENST00000493727 SCPEP1Q9HB40 452 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 NUP50Q9UKX7 468 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 KCNK7Q9Y2U2 307 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 AUP1Q9Y679 476 aa9.98□□□□□ -0.81
UPF3A-210ENST00000493727 F5H0A9 414 aaPredicted RBP9.97□□□□□ -0.81
UPF3A-210ENST00000493727 GABARAPH6UMI1 98 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 SULT1C2O00338 296 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 CTDSPLO15194 276 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 MELTFP08582 738 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 WNT2P09544 360 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 DTYMKP23919 212 aa9.97□□□□□ -0.81
UPF3A-210ENST00000493727 ZFP36P26651 326 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms