RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 CRTAPO75718 401 aaPredicted RBP11.57□□□□□ -0.56
ATG4B-223ENST00000493618 CELP19835 753 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 CAPGP40121 348 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 KRTAP10-11P60412 298 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 RPL23AP62750 156 aaKnown RBP11.57□□□□□ -0.56
ATG4B-223ENST00000493618 GPR176Q14439 515 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 ETV3LQ6ZN32 361 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 C8orf86Q6ZUL3 223 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 SLC35E3Q7Z769 313 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 C8orf59Q8N0T1 100 aaPredicted RBP11.57□□□□□ -0.56
ATG4B-223ENST00000493618 TMEM104Q8NE00 496 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 BPIFB6Q8NFQ5 453 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 OR52M1Q8NGK5 317 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 OR1L1Q8NH94 360 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 CHPT1Q8WUD6 406 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 DERL3Q96Q80 235 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 RCC2Q9P258 522 aaKnown RBP11.57□□□□□ -0.56
ATG4B-223ENST00000493618 PSORS1C1Q9UIG5 152 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 TRAPPC2LQ9UL33 140 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 PEX16Q9Y5Y5 336 aa11.57□□□□□ -0.56
ATG4B-223ENST00000493618 UBE2QL1A1L167 161 aa11.56□□□□□ -0.56
ATG4B-223ENST00000493618 NUDT19A8MXV4 375 aa11.56□□□□□ -0.56
ATG4B-223ENST00000493618 ZNF736B4DX44 427 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-223ENST00000493618 K7EIL1 84 aa11.56□□□□□ -0.56
ATG4B-223ENST00000493618 MGMTP16455 207 aa11.56□□□□□ -0.56
ATG4B-223ENST00000493618 IL3RAP26951 378 aa11.56□□□□□ -0.56
ATG4B-223ENST00000493618 HOXD3P31249 432 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-223ENST00000493618 TAS2R43P59537 309 aa11.56□□□□□ -0.56
ATG4B-223ENST00000493618 INSL4Q14641 139 aa11.56□□□□□ -0.56
ATG4B-223ENST00000493618 LINC00311Q8N616 119 aa11.56□□□□□ -0.56
ATG4B-223ENST00000493618 LINC00482Q8N8I6 264 aa11.56□□□□□ -0.56
ATG4B-223ENST00000493618 KLHL30-AS1Q8NEE0 82 aa11.56□□□□□ -0.56
ATG4B-223ENST00000493618 RTN4IP1Q8WWV3 396 aaPredicted RBP11.56□□□□□ -0.56
ATG4B-223ENST00000493618 FAM46BQ96A09 425 aa11.56□□□□□ -0.56
ATG4B-223ENST00000493618 RCC1LQ96I51 464 aaKnown RBP11.56□□□□□ -0.56
ATG4B-223ENST00000493618 DUX3Q96PT4 197 aa11.56□□□□□ -0.56
ATG4B-223ENST00000493618 IGHG2P01859 326 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 HBZP02008 142 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 RCC1P18754 421 aaPredicted RBP11.55□□□□□ -0.56
ATG4B-223ENST00000493618 ZNF134P52741 427 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 WNT4P56705 351 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 EBI3Q14213 229 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 LCNL1Q6ZST4 164 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 OR2W3Q7Z3T1 314 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 FOXRED2Q8IWF2 684 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 MRPL41Q8IXM3 137 aaKnown RBP11.55□□□□□ -0.56
ATG4B-223ENST00000493618 IZUMO1Q8IYV9 350 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 STPG2Q8N412 459 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 Q8N6K4 173 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 Q8N9W7 124 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 ZNF439Q8NDP4 499 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 OR2T10Q8NGZ9 312 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 TFAP2CQ92754 450 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 ST6GALNAC6Q969X2 333 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 SPACA1Q9HBV2 294 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 C8orf4Q9NR00 106 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 CNOT2Q9NZN8 540 aaKnown RBP11.55□□□□□ -0.56
ATG4B-223ENST00000493618 GNG12Q9UBI6 72 aa11.55□□□□□ -0.56
ATG4B-223ENST00000493618 WI2-2373I1.2A0A1W2PRP0 233 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 ANKRD65E5RJM6 399 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 SPINT2O43291 252 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 GPR12P47775 334 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 SLC35B1P78383 322 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 GNMTQ14749 295 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 CT45A1Q5HYN5 189 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 C6orf183Q5T699 404 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 OGFRL1Q5TC84 451 aaPredicted RBP11.54□□□□□ -0.56
ATG4B-223ENST00000493618 SIGIRRQ6IA17 410 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 LYPD6Q86Y78 171 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 TGIF2LXQ8IUE1 241 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 NANOGP1Q8N7R0 232 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 C8orf31Q8N9H6 132 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 OR51D1Q8NGF3 324 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 CT45A3Q8NHU0 189 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 Q96M66 194 aa11.54□□□□□ -0.56
ATG4B-223ENST00000493618 MOSP00540 346 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 CD1BP29016 333 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 THBS3P49746 956 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 F2RL1P55085 397 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 NKAPLQ5M9Q1 402 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 FAM27D1Q5T7N8 215 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 SLC25A48Q6ZT89 311 aaKnown RBP11.53□□□□□ -0.56
ATG4B-223ENST00000493618 OR52L2PQ8NGH6 319 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 FBLIM1Q8WUP2 373 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 MRPS24Q96EL2 167 aaKnown RBP11.53□□□□□ -0.56
ATG4B-223ENST00000493618 S1PR3Q99500 378 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 ABCG5Q9H222 651 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 KCNK15Q9H427 330 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 TAF9BQ9HBM6 251 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 PLSCR3Q9NRY6 295 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 PLCXD1Q9NUJ7 323 aa11.53□□□□□ -0.56
ATG4B-223ENST00000493618 LIN7CQ9NUP9 197 aaKnown RBP11.53□□□□□ -0.56
ATG4B-223ENST00000493618 RPLP1P05386 114 aaKnown RBP11.52□□□□□ -0.57
ATG4B-223ENST00000493618 FUT3P21217 361 aa11.52□□□□□ -0.57
ATG4B-223ENST00000493618 GP2P55259 537 aaKnown RBP11.52□□□□□ -0.57
ATG4B-223ENST00000493618 RAB25P57735 213 aa11.52□□□□□ -0.57
ATG4B-223ENST00000493618 GABPB1Q06547 395 aaPredicted RBP11.52□□□□□ -0.57
ATG4B-223ENST00000493618 DEFB121Q5J5C9 76 aa11.52□□□□□ -0.57
ATG4B-223ENST00000493618 OR10K2Q6IF99 312 aa11.52□□□□□ -0.57
ATG4B-223ENST00000493618 CDH26Q8IXH8 852 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms