RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 NEIL1Q96FI4 390 aaPredicted RBP5.79□□□□□ -1.48
EWSR1-220ENST00000493426 PGAM5Q96HS1 289 aa5.79□□□□□ -1.48
EWSR1-220ENST00000493426 CYYR1Q96J86 154 aa5.79□□□□□ -1.48
EWSR1-220ENST00000493426 SPOCK3Q9BQ16 436 aa5.79□□□□□ -1.48
EWSR1-220ENST00000493426 VAMP8Q9BV40 100 aa5.79□□□□□ -1.48
EWSR1-220ENST00000493426 WDR61Q9GZS3 305 aaKnown RBP5.79□□□□□ -1.48
EWSR1-220ENST00000493426 MTIF3Q9H2K0 278 aaKnown RBP5.79□□□□□ -1.48
EWSR1-220ENST00000493426 PARLQ9H300 379 aa5.79□□□□□ -1.48
EWSR1-220ENST00000493426 TAAR3PQ9P1P4 343 aa5.79□□□□□ -1.48
EWSR1-220ENST00000493426 SERGEFQ9UGK8 458 aa5.79□□□□□ -1.48
EWSR1-220ENST00000493426 LAMA3Q16787 3333 aa5.79□□□□□ -1.48
EWSR1-220ENST00000493426 NOTCH4Q99466 2003 aa5.79□□□□□ -1.48
EWSR1-220ENST00000493426 SZT2Q5T011 3432 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 MPDZO75970 2070 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 GOLGA4Q13439 2230 aaKnown RBP5.78□□□□□ -1.48
EWSR1-220ENST00000493426 TRBV6-6A0A0A6YYG2 114 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 IGHV2-70DA0A0C4DH43 119 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 OTOL1A6NHN0 477 aaPredicted RBP5.78□□□□□ -1.48
EWSR1-220ENST00000493426 LRRC3CA6NJW4 275 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 ZNF814B7Z6K7 855 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 SSSCA1O60232 199 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 NUPR1O60356 82 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 WDR1O75083 606 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 PDCD6O75340 191 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 WISP1O95388 367 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 CNOT4O95628 575 aaKnown RBP5.78□□□□□ -1.48
EWSR1-220ENST00000493426 NRASP01111 189 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 KRASP01116 189 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 SERPINA7P05543 415 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 IGLC2P0DOY2 106 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 IGLC3P0DOY3 106 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 OMGP23515 440 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 IL12BP29460 328 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 GJA4P35212 333 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 EFNA3P52797 238 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 PTTG1IPP53801 180 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 RRADP55042 308 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 BIDP55957 195 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 CLDN15P56746 228 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 RPP30P78346 268 aaKnown RBP5.78□□□□□ -1.48
EWSR1-220ENST00000493426 POU3F1Q03052 451 aaPredicted RBP5.78□□□□□ -1.48
EWSR1-220ENST00000493426 C17orf67Q0P5P2 114 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 MALLQ13021 153 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 ZNF154Q13106 437 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 CNN3Q15417 329 aaKnown RBP5.78□□□□□ -1.48
EWSR1-220ENST00000493426 TRIP6Q15654 476 aaKnown RBP5.78□□□□□ -1.48
EWSR1-220ENST00000493426 NSDHLQ15738 373 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 MSMO1Q15800 293 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 TRIM61Q5EBN2 209 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 C10orf128Q5T292 105 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 LHFPL2Q6ZUX7 228 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 SMIM15Q7Z3B0 74 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 CPEB2Q7Z5Q1 589 aaKnown RBP5.78□□□□□ -1.48
EWSR1-220ENST00000493426 TBC1D26Q86UD7 250 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 TMEM256Q8N2U0 113 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 ZNF738Q8NE65 137 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 GJC3Q8NFK1 279 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 OR11L1Q8NGX0 322 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 CORO2AQ92828 525 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 THOC3Q96J01 351 aaKnown RBP5.78□□□□□ -1.48
EWSR1-220ENST00000493426 OXGR1Q96P68 337 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 HDHD3Q9BSH5 251 aaPredicted RBP5.78□□□□□ -1.48
EWSR1-220ENST00000493426 SLC39A9Q9NUM3 307 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 ELOVL5Q9NYP7 299 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 FOXJ2Q9P0K8 574 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 ZNF391Q9UJN7 358 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 TP53TG3Q9ULZ0 132 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 B3GALT1Q9Y5Z6 326 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 LY96Q9Y6Y9 160 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 FREM3P0C091 2139 aa5.78□□□□□ -1.48
EWSR1-220ENST00000493426 YLPM1P49750 1951 aaKnown RBP5.77□□□□□ -1.49
EWSR1-220ENST00000493426 PRRC2BQ5JSZ5 2229 aaKnown RBP5.77□□□□□ -1.49
EWSR1-220ENST00000493426 TRAV30A0A087WSZ9 112 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 IGHV2OR16-5A0A0B4J2B6 119 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 A0A0U1RQK1 487 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 ZNF320A2RRD8 509 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 TMEM150CB9EJG8 249 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 SLC33A1O00400 549 aaPredicted RBP5.77□□□□□ -1.49
EWSR1-220ENST00000493426 DEGS1O15121 323 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 TLX3O43711 291 aaPredicted RBP5.77□□□□□ -1.49
EWSR1-220ENST00000493426 TRAF3IP2O43734 574 aaPredicted RBP5.77□□□□□ -1.49
EWSR1-220ENST00000493426 PDE6DO43924 150 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 CIDEAO60543 219 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 NAPSAO96009 420 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 IL11P20809 199 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 CD1BP29016 333 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 GCH1P30793 250 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 APOBEC3AP31941 199 aaPredicted RBP5.77□□□□□ -1.49
EWSR1-220ENST00000493426 OPRM1P35372 400 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 TNFRSF4P43489 277 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 LHX2P50458 406 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 LINC00310P59036 64 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 FXYD4P59646 89 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 PPP1CBP62140 327 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 PLCXD2Q0VAA5 305 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 SHBQ15464 509 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 RSPO1Q2MKA7 263 aaPredicted RBP5.77□□□□□ -1.49
EWSR1-220ENST00000493426 KRTAP27-1Q3LI81 207 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 HLA-DQA1Q5Y7H0 255 aa5.77□□□□□ -1.49
EWSR1-220ENST00000493426 PET117Q6UWS5 81 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms