RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 LYPD6Q86Y78 171 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 ACBD7Q8N6N7 88 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 SUMF2Q8NBJ7 301 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 OR10AC1Q8NH08 325 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 TNFAIP8L1Q8WVP5 186 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 JAM3Q9BX67 310 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 PAK1IP1Q9NWT1 392 aaPredicted RBP8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 IL36GQ9NZH8 169 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 DHDHQ9UQ10 334 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 ERGIC3Q9Y282 383 aa8.54□□□□□ -1.04
SNRNP200-207ENST00000493271 SORL1Q92673 2214 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 J3QRE1 110 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 GABRPO00591 440 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 ZNF780AO75290 641 aaPredicted RBP8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 OR7C1O76099 320 aaPredicted RBP8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 HLA-DRB1P01911 266 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 FCGR1AP12314 374 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 SPNP16150 400 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 FASP25445 335 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 VEGFCP49767 419 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 RAB9AP51151 201 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 KIAA0141Q14154 515 aaPredicted RBP8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 RCN1Q15293 331 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 SLC25A30Q5SVS4 291 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 ASCL4Q6XD76 172 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 OVCH2Q7RTZ1 564 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 SYS1Q8N2H4 156 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 STX19Q8N4C7 294 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 TCTEX1D1Q8N7M0 179 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 DCUN1D4Q92564 292 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 PELI1Q96FA3 418 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 CIB1Q99828 191 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 FAM192AQ9GZU8 254 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 GNB4Q9HAV0 340 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 EDA2RQ9HAV5 297 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 SPACA1Q9HBV2 294 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 IMPAD1Q9NX62 359 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 ST3GAL6Q9Y274 331 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 CSMD3Q7Z407 3707 aa8.53□□□□□ -1.04
SNRNP200-207ENST00000493271 TRAV41A0A0B4J266 112 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 LINC01619G3V211 115 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 J3QLW9 94 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 SPINT2O43291 252 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 LANCL1O43813 399 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 HTR3BO95264 441 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 CSTBP04080 98 aaKnown RBP8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 ZNF19P17023 458 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 F2RL1P55085 397 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 GNB1P62873 340 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 MMDQ15546 238 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 PIGYQ3MUY2 71 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 C6orf183Q5T699 404 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 PYHIN1Q6K0P9 492 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 ZNF529Q6P280 563 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 ACSM6Q6P461 480 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 TRAT1Q6PIZ9 186 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 TSEN15Q8WW01 171 aaKnown RBP8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 C4orf36Q96KX1 117 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 S100A13Q99584 98 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 CST11Q9H112 138 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 METTL9Q9H1A3 318 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 GNG12Q9UBI6 72 aa8.52□□□□□ -1.05
SNRNP200-207ENST00000493271 TRAV39A0A0B4J263 110 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 ZNF736B4DX44 427 aaPredicted RBP8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 AIPO00170 330 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 CA11O75493 328 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 JTBO76095 146 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 CD2P06729 351 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 VHLP40337 213 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 RBM11P57052 281 aaKnown RBP8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 PITPNAQ00169 270 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 LSAMPQ13449 338 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 ZFAND6Q6FIF0 208 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 ZNF497Q6ZNH5 498 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 ZNF554Q86TJ5 538 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 SATL1Q86VE3 508 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 SGPP2Q8IWX5 399 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 MINDY2Q8NBR6 621 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 ZNF439Q8NDP4 499 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 OR52N1Q8NH53 320 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 OR5AK2Q8NH90 309 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 IL17DQ8TAD2 202 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 DLX4Q92988 240 aaPredicted RBP8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 FLYWCH2Q96CP2 140 aaKnown RBP8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 OR4C12Q96R67 309 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 SPATA25Q9BR10 227 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 TOLLIPQ9H0E2 274 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 KLK15Q9H2R5 256 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 EXOGQ9Y2C4 368 aaKnown RBP8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 GMPPBQ9Y5P6 360 aa8.51□□□□□ -1.05
SNRNP200-207ENST00000493271 TRIM64CA6NLI5 447 aa8.5□□□□□ -1.05
SNRNP200-207ENST00000493271 G3V318 75 aa8.5□□□□□ -1.05
SNRNP200-207ENST00000493271 ATP6V0E1O15342 81 aa8.5□□□□□ -1.05
SNRNP200-207ENST00000493271 HSPA12AO43301 675 aa8.5□□□□□ -1.05
SNRNP200-207ENST00000493271 MT-ND4P03905 459 aa8.5□□□□□ -1.05
SNRNP200-207ENST00000493271 IFNA6P05013 189 aa8.5□□□□□ -1.05
SNRNP200-207ENST00000493271 LGALS1P09382 135 aaKnown RBP8.5□□□□□ -1.05
SNRNP200-207ENST00000493271 IGHV4-30-4P0DP06 118 aa8.5□□□□□ -1.05
SNRNP200-207ENST00000493271 SLC2A2P11168 524 aaPredicted RBP8.5□□□□□ -1.05
SNRNP200-207ENST00000493271 MYF6P23409 242 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms