RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 RCVRNP35243 200 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 ACTR1BP42025 376 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 CRATP43155 626 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 DYNLL1P63167 89 aaKnown RBP1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 GTF2BQ00403 316 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 CENPWQ5EE01 88 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 C10orf91Q5T1B1 145 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 FAM45BPQ6NSW5 357 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 EBLN2Q6P2I7 272 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 TTC33Q6PID6 262 aaPredicted RBP1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 SPNS3Q6ZMD2 512 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 TCF23Q7RTU1 214 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 VN1R4Q7Z5H5 301 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 LRP11Q86VZ4 500 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 LFNGQ8NES3 379 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 ATP6V1C2Q8NEY4 427 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR11G2Q8NGC1 345 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR5D18Q8NGL1 313 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 OR5L1Q8NGL2 311 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 MUC7Q8TAX7 377 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 SPPL2BQ8TCT7 592 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 ZCCHC13Q8WW36 166 aaKnown RBP1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 POTEKPQ9BYX7 375 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 CHST5Q9GZS9 411 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 SLC23A2Q9UGH3 650 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 LINC00588Q9Y4M8 146 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 PHLDA3Q9Y5J5 127 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 PTPRKQ15262 1439 aa1.28□□□□□ -2.2
HMGB1P30-201ENST00000492455 YLPM1P49750 1951 aaKnown RBP1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 LTBP2Q14767 1821 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 NACADO15069 1562 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 ARAP3Q8WWN8 1544 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 SPATA31E1Q6ZUB1 1445 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 IGLV10-54A0A075B6I4 117 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 IGKV1-12A0A0C4DH73 117 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 H3BSA7 217 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 GOLGA8RI6L899 631 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 LIN7AO14910 233 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 CYTH3O43739 400 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 ASS1P00966 412 aaKnown RBP1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 IGKV1D-12P01611 117 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 ORM1P02763 201 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 CTSEP14091 401 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 PVALBP20472 110 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 SKP1P63208 163 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 OR8G1Q15617 311 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 EXOC3L4Q17RC7 722 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 PYCR3Q53H96 274 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 HCP5Q6MZN7 132 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 SLC13A5Q86YT5 568 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 HS3ST5Q8IZT8 346 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 BLIDQ8IZY5 108 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 C2orf73Q8N5S3 287 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 OTUD6BQ8N6M0 293 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 YIPF7Q8N8F6 280 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 OR5K1Q8NHB7 308 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 ZNRF2Q8NHG8 242 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 STOML3Q8TAV4 291 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 CMTM2Q8TAZ6 248 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 HIST1H2BAQ96A08 127 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 RAD51AP1Q96B01 352 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 GALMQ96C23 342 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 GPR22Q99680 433 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 HIGD2AQ9BW72 106 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 WDR54Q9H977 334 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 KCNIP2Q9NS61 270 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 TMEM216Q9P0N5 145 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 MCTS1Q9ULC4 181 aaKnown RBP1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 OR51B4Q9Y5P0 310 aa1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 PUS1Q9Y606 427 aaKnown RBP eCLIP1.27□□□□□ -2.21
HMGB1P30-201ENST00000492455 MYO15BQ96JP2 1530 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 RAD50Q92878 1312 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 A0A1W2PNM2 257 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 EEF1E1O43324 174 aaKnown RBP1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 PSCAO43653 123 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 ADAP1O75689 374 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 CBR3O75828 277 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 CDS2O95674 445 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 OR12D1P0DN82 309 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 ZNF22P17026 224 aaPredicted RBP1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 GADD45AP24522 165 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 KRTAP12-3P60328 96 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 UBE2G2P60604 165 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 APOFQ13790 326 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 PDGFRLQ15198 375 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 C4orf26Q17RF5 130 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 LRRC26Q2I0M4 334 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 SCXQ7RTU7 201 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 DOLPP1Q86YN1 238 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 ZBTB8OSQ8IWT0 167 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 OR52E4Q8NGH9 312 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 SUN5Q8TC36 379 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 OR5P3Q8WZ94 311 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 TAMM41Q96BW9 452 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 SMIM12Q96EX1 92 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 C7orf50Q9BRJ6 194 aaKnown RBP1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 MTCH2Q9Y6C9 303 aa1.26□□□□□ -2.21
HMGB1P30-201ENST00000492455 DHX57Q6P158 1386 aaKnown RBP1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 NLRC5Q86WI3 1866 aa1.25□□□□□ -2.21
HMGB1P30-201ENST00000492455 CLUHO75153 1309 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms