RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 PPIAL4CA0A0B4J2A2 164 aa8□□□□□ -1.13
USP54-214ENST00000492357 C12orf77C9JDV5 145 aa8□□□□□ -1.13
USP54-214ENST00000492357 INMT-MINDY4F8WBC2 141 aa8□□□□□ -1.13
USP54-214ENST00000492357 C15orf65H3BRN8 121 aa8□□□□□ -1.13
USP54-214ENST00000492357 YPEL1O60688 119 aa8□□□□□ -1.13
USP54-214ENST00000492357 PPYP01298 95 aa8□□□□□ -1.13
USP54-214ENST00000492357 GSTT2P0CG29 244 aa8□□□□□ -1.13
USP54-214ENST00000492357 RCC1P18754 421 aaPredicted RBP8□□□□□ -1.13
USP54-214ENST00000492357 S100GP29377 79 aa8□□□□□ -1.13
USP54-214ENST00000492357 EDDM3BP56851 147 aa8□□□□□ -1.13
USP54-214ENST00000492357 HERV-K104P61576 105 aa8□□□□□ -1.13
USP54-214ENST00000492357 RPL31P62899 125 aaKnown RBP8□□□□□ -1.13
USP54-214ENST00000492357 ESCO2Q56NI9 601 aa8□□□□□ -1.13
USP54-214ENST00000492357 WDR25Q64LD2 544 aaPredicted RBP8□□□□□ -1.13
USP54-214ENST00000492357 HEPN1Q6WQI6 88 aa8□□□□□ -1.13
USP54-214ENST00000492357 Q6ZPA2 131 aa8□□□□□ -1.13
USP54-214ENST00000492357 RTN4RL2Q86UN3 420 aa8□□□□□ -1.13
USP54-214ENST00000492357 H1FOOQ8IZA3 346 aaPredicted RBP8□□□□□ -1.13
USP54-214ENST00000492357 SLC38A6Q8IZM9 456 aa8□□□□□ -1.13
USP54-214ENST00000492357 KIR3DL3Q8N743 410 aa8□□□□□ -1.13
USP54-214ENST00000492357 LY6G5BQ8NDX9 201 aa8□□□□□ -1.13
USP54-214ENST00000492357 OR13A1Q8NGR1 328 aa8□□□□□ -1.13
USP54-214ENST00000492357 C10orf105Q8TEF2 133 aa8□□□□□ -1.13
USP54-214ENST00000492357 TNFRSF14Q92956 283 aa8□□□□□ -1.13
USP54-214ENST00000492357 AKR1E2Q96JD6 320 aa8□□□□□ -1.13
USP54-214ENST00000492357 ZNF714Q96N38 554 aa8□□□□□ -1.13
USP54-214ENST00000492357 YPEL2Q96QA6 119 aa8□□□□□ -1.13
USP54-214ENST00000492357 GINS4Q9BRT9 223 aa8□□□□□ -1.13
USP54-214ENST00000492357 C20orf85Q9H1P6 137 aa8□□□□□ -1.13
USP54-214ENST00000492357 NUDT15Q9NV35 164 aa8□□□□□ -1.13
USP54-214ENST00000492357 CALYQ9NYX4 217 aa8□□□□□ -1.13
USP54-214ENST00000492357 CTSZQ9UBR2 303 aa8□□□□□ -1.13
USP54-214ENST00000492357 GPR132Q9UNW8 380 aa8□□□□□ -1.13
USP54-214ENST00000492357 GAB2Q9UQC2 676 aa8□□□□□ -1.13
USP54-214ENST00000492357 OR2W1Q9Y3N9 320 aa8□□□□□ -1.13
USP54-214ENST00000492357 A0A087X0M5 115 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 LINC00854A0A1B0GVQ3 168 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 A0A1B0GX30 115 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 C7orf66A4D0T2 115 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 SNRPGP15A8MWD9 76 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 M0QYG6 137 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 FOXH1O75593 365 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 IGHV2-5P01817 119 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 HBZP02008 142 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 PMP2P02689 132 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 CTSDP07339 412 aaPredicted RBP7.99□□□□□ -1.13
USP54-214ENST00000492357 H2AFB2P0C5Z0 115 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 ZNF728P0DKX0 622 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 NDUFB7P17568 137 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 RAB7AP51149 207 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 RND3P61587 244 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 GNB2P62879 340 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 EDDM3AQ14507 147 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 HERPUD1Q15011 391 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 DEFB113Q30KQ7 82 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 SCGB2B2Q4G0G5 96 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 AADACL3Q5VUY0 350 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 METTL11BQ5VVY1 283 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 LYPD2Q6UXB3 125 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 KCTD9Q7L273 389 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 TCTEX1D1Q8N7M0 179 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 OR4D10Q8NGI6 311 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 OR13C8Q8NGS7 320 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 CHAC2Q8WUX2 184 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 ARL11Q969Q4 196 aa7.99□□□□□ -1.13
USP54-214ENST00000492357 ZNF2Q9BSG1 426 aaPredicted RBP7.99□□□□□ -1.13
USP54-214ENST00000492357 UNKLQ9H9P5 680 aaKnown RBP7.99□□□□□ -1.13
USP54-214ENST00000492357 GPN1Q9HCN4 374 aaPredicted RBP7.99□□□□□ -1.13
USP54-214ENST00000492357 FAM212BQ9NTI7 297 aaPredicted RBP7.99□□□□□ -1.13
USP54-214ENST00000492357 IGKV1-6A0A0C4DH72 117 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 FAM172BPA6NC97 362 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 C17orf98A8MV24 154 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 LYNX1G3V0Z9 82 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 M0R1W7 72 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 HSPA12AO43301 675 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 SSX4O60224 188 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 SCTP09683 121 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 TRAPPC2P0DI81 140 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 TRAPPC2BP0DI82 140 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 LYNX1P0DP58 116 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 CD34P28906 385 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 FCGR2CP31995 323 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 CCR6P51684 374 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 LUMP51884 338 aaPredicted RBP7.98□□□□□ -1.13
USP54-214ENST00000492357 DHODHQ02127 395 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 TMEM128Q5BJH2 165 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 IGSF11Q5DX21 431 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 SLC25A42Q86VD7 318 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 CMTM1Q8IZ96 169 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 CCDC71LQ8N9Z2 235 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.98□□□□□ -1.13
USP54-214ENST00000492357 MRGPRDQ8TDS7 321 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 ASB13Q8WXK3 278 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 MAFIPQ8WZ33 124 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 UPRTQ96BW1 309 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 C1orf159Q96HA4 380 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 SSBP3Q9BWW4 388 aaPredicted RBP7.98□□□□□ -1.13
USP54-214ENST00000492357 IDI2-AS1Q9NZ38 188 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 ZNF69Q9UC07 566 aa7.98□□□□□ -1.13
USP54-214ENST00000492357 RPUSD1Q9UJJ7 312 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms