RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 TMEM30CPA0ZSE6 113 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 ANXA3P12429 323 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 KIR2DS4P43632 304 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 KIR2DS1Q14954 304 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 ZNF880Q6PDB4 577 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 LYPD2Q6UXB3 125 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 ZNF818PQ6ZRF7 136 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 RBMXL1Q96E39 390 aaKnown RBP11.61□□□□□ -0.55
SMPD4-219ENST00000491128 EGLN1Q9GZT9 426 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 MS4A5Q9H3V2 200 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 TMEM106BQ9NUM4 274 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 RASL12Q9NYN1 266 aa11.61□□□□□ -0.55
SMPD4-219ENST00000491128 C13orf42A0A1B0GVH6 325 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 OOEPA6NGQ2 149 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 CD8AP01732 235 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 RPS2P15880 293 aaKnown RBP11.6□□□□□ -0.55
SMPD4-219ENST00000491128 GNRHRP30968 328 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 CEACAM6P40199 344 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 LRRC37A5PQ49AS3 106 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 NOXA1Q86UR1 476 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 TMEM204Q9BSN7 226 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 RIMS4Q9H426 269 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-219ENST00000491128 TMA7Q9Y2S6 64 aaKnown RBP11.6□□□□□ -0.55
SMPD4-219ENST00000491128 H3BUI4 141 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 IFNL4K9M1U5 179 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 NDUFS7O75251 213 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 FCN3O75636 299 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 HBZP02008 142 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 CDKN1AP38936 164 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 MDH2P40926 338 aaKnown RBP11.6□□□□□ -0.55
SMPD4-219ENST00000491128 ABCA11PQ4W5N1 156 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 LY6G6FQ5SQ64 297 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 STUMQ69YW2 141 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 GAPTQ8N292 157 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 ARL11Q969Q4 196 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 MOB3AQ96BX8 217 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 GAFA1Q96PS6 74 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 UBTD1Q9HAC8 227 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 SLC2A9Q9NRM0 540 aa11.6□□□□□ -0.55
SMPD4-219ENST00000491128 CEACAM18A8MTB9 384 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 TMEM178BH3BS89 294 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 GLAP06280 429 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 OR8U9P0C7N5 309 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 PPP1CCP36873 323 aaKnown RBP11.59□□□□□ -0.55
SMPD4-219ENST00000491128 TESK1Q15569 626 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 TCTE3Q8IZS6 198 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 OR8U1Q8NH10 309 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 RTN4IP1Q8WWV3 396 aaPredicted RBP11.59□□□□□ -0.55
SMPD4-219ENST00000491128 LEAP2Q969E1 77 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 MBNL3Q9NUK0 354 aaKnown RBP11.59□□□□□ -0.55
SMPD4-219ENST00000491128 RDH8Q9NYR8 311 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 RBM7Q9Y580 266 aaKnown RBP11.59□□□□□ -0.55
SMPD4-219ENST00000491128 TRBV6-7A0A0A0MS04 114 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 TRBV6-6A0A0A6YYG2 114 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 IGHV1-69-2A0A0G2JMI3 117 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 LRRC30A6NM36 301 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 G3V3Q6 166 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 K7N7A8 449 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 CD55P08174 381 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 HOXB5P09067 269 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 EFNB3Q15768 340 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 AVPI1Q5T686 147 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 OR4A4PQ8NGN8 299 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 Q8TCH9 128 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 ARPC5LQ9BPX5 153 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 SLC5A7Q9GZV3 580 aa11.59□□□□□ -0.55
SMPD4-219ENST00000491128 CELSR2Q9HCU4 2923 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 MED13LQ71F56 2210 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 SFT2D2O95562 160 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 DIRAS3O95661 229 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 OR5AC1P0C628 307 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 NDUFB7P17568 137 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 IL2RGP31785 369 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 SLC35E4Q6ICL7 350 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 Q6ZS49 121 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 MITD1Q8WV92 249 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 PHB2Q99623 299 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 KCNIP1Q9NZI2 227 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 UBR5O95071 2799 aaPredicted RBP11.58□□□□□ -0.56
SMPD4-219ENST00000491128 PPIAL4EA0A075B759 164 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 ODAMA1E959 279 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 PPIAL4DF5H284 164 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 KCNAB3O43448 404 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 ADH4P08319 380 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 PPIAL4FP0DN26 164 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 LINC00205P59089 165 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 FAM222BQ8WU58 562 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 SNX22Q96L94 193 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 DIRC2Q96SL1 478 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 DNTTIP1Q9H147 329 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 NARFLQ9H6Q4 476 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 MGAT4AQ9UM21 535 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 PPIAL4AQ9Y536 164 aa11.58□□□□□ -0.56
SMPD4-219ENST00000491128 NBPF19A0A087WUL8 3843 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 A1L4Q6 167 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 DUS4LO95620 317 aaKnown RBP11.57□□□□□ -0.56
SMPD4-219ENST00000491128 CTSDP07339 412 aaPredicted RBP11.57□□□□□ -0.56
SMPD4-219ENST00000491128 DHODHQ02127 395 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 SHEQ5VZ18 495 aa11.57□□□□□ -0.56
SMPD4-219ENST00000491128 MEX3BQ6ZN04 569 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms