RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 ZNF724A8MTY0 619 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 TRDCB7Z8K6 153 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 C9JQL5 133 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 NPIPA2E9PIF3 369 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 F5H5K5 113 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 H3BQ15 152 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 H3BSH0 61 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 RPL36A-HNRNPH2H7BZ11 118 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 H7C1C5 153 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CLDN34H7C241 214 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 M0R036 132 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CYB5BO43169 146 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SGCEO43556 437 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CHST1O43916 411 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PRKNO60260 465 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 DHRS3O75911 302 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 DFFBO76075 338 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 FARS2O95363 451 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 DIRAS3O95661 229 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PTBP3O95758 552 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 NRASP01111 189 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 GCGP01275 180 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 IFNA10P01566 189 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 IGHV2-70P01814 119 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 IGHEP01854 428 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 HSPB1P04792 205 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 KLK3P07288 261 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CA3P07451 260 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 HEXBP07686 556 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SRP19P09132 144 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CST2P09228 141 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 WNT2P09544 360 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SFTA3P0C7M3 94 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OR8U8P0C7N1 319 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OR8U9P0C7N5 309 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PGA4P0DJD7 388 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 MYOGP15173 224 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ADCYAP1P18509 176 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 TCN2P20062 427 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 VDAC1P21796 283 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 UCP1P25874 307 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 GNRHRP30968 328 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OTX1P32242 354 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SFTPDP35247 375 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 LPAR6P43657 344 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 NKX2-1P43699 371 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 RPS10P46783 165 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CAPZBP47756 277 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 GLIPR1P48060 266 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 NPBWR2P48146 333 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SULT1A1P50225 295 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF41P51814 821 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 DSCR4P56555 118 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 NDUFA6P56556 154 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PIGPP57054 158 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CARD18P57730 90 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF121P58317 390 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 TAS2R30P59541 319 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 UBE2KP61086 200 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 RND3P61587 244 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PPP1CAP62136 330 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 LCN6P62502 163 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 RPL23AP62750 156 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 VAMP2P63027 116 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 MRPS34P82930 218 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 BAXQ07812 192 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 FAM27E3Q08E93 113 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PLCXD2Q0VAA5 305 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 PNRC1Q12796 327 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF266Q14584 549 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 IL11RAQ14626 422 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CLINT1Q14677 625 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ATXN7L3Q14CW9 347 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 OR8B8Q15620 311 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 EXT1Q16394 746 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 NNATQ16517 81 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 TAF9Q16594 264 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM241Q24JQ0 296 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 MPV17LQ2QL34 196 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 DEFB110Q30KQ9 67 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 NKAIN1Q4KMZ8 207 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 HIKESHIQ53FT3 197 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF542PQ5EBM4 170 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 KRBOX4Q5JUW0 171 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 C10orf128Q5T292 105 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 TMEM42Q69YG0 159 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 LCN10Q6JVE6 187 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 HEPN1Q6WQI6 88 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 FBXW12Q6X9E4 464 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF600Q6ZNG1 722 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 Q6ZRG5 221 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 FOXL2NBQ6ZUU3 175 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 LYZL2Q7Z4W2 148 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ABHD12BQ7Z5M8 362 aaPredicted RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 CPEB2Q7Z5Q1 589 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 SLC35E3Q7Z769 313 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 TBC1D26Q86UD7 250 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF429Q86V71 674 aa1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 RPS19BP1Q86WX3 136 aaKnown RBP1.73□□□□□ -2.13
SNRNP40-207ENST00000491106 ZNF695Q8IW36 515 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms