RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ZNF665Q9H7R5 613 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 ELOVL5Q9NYP7 299 aa6.29□□□□□ -1.4
NPHP3-208ENST00000490993 PUS1Q9Y606 427 aaKnown RBP eCLIP6.29□□□□□ -1.4
NPHP3-208ENST00000490993 ASCC3Q8N3C0 2202 aaKnown RBP6.28□□□□□ -1.4
NPHP3-208ENST00000490993 CHST1O43916 411 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 PGLYRP1O75594 196 aaPredicted RBP6.28□□□□□ -1.4
NPHP3-208ENST00000490993 KRASP01116 189 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 IGHG3P01860 377 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 PTAFRP25105 342 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 S100A2P29034 98 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 GUK1Q16774 197 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 LY6G6FQ5SQ64 297 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF66Q6ZN08 573 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 MOGAT3Q86VF5 341 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 SELENOHQ8IZQ5 122 aaKnown RBP6.28□□□□□ -1.4
NPHP3-208ENST00000490993 UBAC2Q8NBM4 344 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 BTF3L4Q96K17 158 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 PARP12Q9H0J9 701 aaKnown RBP6.28□□□□□ -1.4
NPHP3-208ENST00000490993 MTCH1Q9NZJ7 389 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 ZDHHC8Q9ULC8 765 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 HEATR5AQ86XA9 2040 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 TRAV14DV4A0A0A6YYC5 116 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 SFTA3P0C7M3 94 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 Q3ZCU0 254 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 SLC35E4Q6ICL7 350 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 FAM122CQ6P4D5 195 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 ASCL5Q7RTU5 278 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF645Q8N7E2 425 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 SNX22Q96L94 193 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 MSL2Q9HCI7 577 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 TUBD1Q9UJT1 453 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 TMEM218A2RU14 115 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF205O95201 554 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 KITLGP21583 273 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 SULT1A2P50226 295 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 PLGLAQ15195 96 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 SIGIRRQ6IA17 410 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 OR10X1Q8NGY0 326 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 LSM10Q969L4 123 aaKnown RBP6.28□□□□□ -1.4
NPHP3-208ENST00000490993 LINC00052Q96N35 136 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 UHRF2Q96PU4 802 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 OR51I2Q9H344 312 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 ANAPC10Q9UM13 185 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 IGLV3-1P01715 115 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 PSG2P11465 335 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 SLC38A11Q08AI6 406 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 TMEM30BQ3MIR4 351 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 ZNF787Q6DD87 383 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 SEC11CQ9BY50 192 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 UQCC1Q9NVA1 299 aa6.28□□□□□ -1.4
NPHP3-208ENST00000490993 FAM90A26D6RGX4 464 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 ABCD4O14678 606 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 DYNLT3P51808 116 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 S100A7AQ86SG5 101 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 FAM90A1Q86YD7 464 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 GCSAMQ8N6F7 178 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 OR4S2Q8NH73 311 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 MARS2Q96GW9 593 aaKnown RBP6.27□□□□□ -1.41
NPHP3-208ENST00000490993 SMDT1Q9H4I9 107 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 TMEM231Q9H6L2 316 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 GFOD1Q9NXC2 390 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 FKBP11Q9NYL4 201 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 A8MXE2 369 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 AESQ08117 197 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 RFESDQ8TAC1 157 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 UBALD1Q8TB05 177 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 TMEM147Q9BVK8 224 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 NARFLQ9H6Q4 476 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 FCGR3BO75015 233 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 OR13C7P0DN81 318 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 ELLP55199 621 aaPredicted RBP6.27□□□□□ -1.41
NPHP3-208ENST00000490993 RSPO4Q2I0M5 234 aaPredicted RBP6.27□□□□□ -1.41
NPHP3-208ENST00000490993 VWA1Q6PCB0 445 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 COLCA1Q6ZS62 124 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 TMEM230Q96A57 120 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 LURAP1Q96LR2 239 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 HBZP02008 142 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 CD3EP07766 207 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 FGF2P09038 288 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 FGF7P21781 194 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 OR2B8PP59922 312 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 TMEM267Q0VDI3 215 aaPredicted RBP6.27□□□□□ -1.41
NPHP3-208ENST00000490993 SSX9Q7RTT3 188 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 C9orf106Q8NAJ2 232 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 FAM57AQ8TBR7 257 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 MMP24Q9Y5R2 645 aa6.27□□□□□ -1.41
NPHP3-208ENST00000490993 IGKV1-27A0A075B6S5 117 aa6.26□□□□□ -1.41
NPHP3-208ENST00000490993 ZNF250P15622 560 aa6.26□□□□□ -1.41
NPHP3-208ENST00000490993 GLRXP35754 106 aa6.26□□□□□ -1.41
NPHP3-208ENST00000490993 THBS3P49746 956 aa6.26□□□□□ -1.41
NPHP3-208ENST00000490993 TMPRSS3P57727 454 aa6.26□□□□□ -1.41
NPHP3-208ENST00000490993 FLI1Q01543 452 aaPredicted RBP6.26□□□□□ -1.41
NPHP3-208ENST00000490993 ZNF818PQ6ZRF7 136 aa6.26□□□□□ -1.41
NPHP3-208ENST00000490993 H1FOOQ8IZA3 346 aaPredicted RBP6.26□□□□□ -1.41
NPHP3-208ENST00000490993 LHX4Q969G2 390 aa6.26□□□□□ -1.41
NPHP3-208ENST00000490993 S100PBPQ96BU1 408 aa6.26□□□□□ -1.41
NPHP3-208ENST00000490993 R3HDM4Q96D70 268 aa6.26□□□□□ -1.41
NPHP3-208ENST00000490993 NEIL1Q96FI4 390 aaPredicted RBP6.26□□□□□ -1.41
NPHP3-208ENST00000490993 SDSLQ96GA7 329 aa6.26□□□□□ -1.41
NPHP3-208ENST00000490993 SLC35B3Q9H1N7 401 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms