RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 CD34P28906 385 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 TALDO1P37837 337 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 GDNFP39905 211 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 PRRX1P54821 245 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 DEFB112Q30KQ8 113 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 CDNFQ49AH0 187 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 OLFML2AQ68BL7 652 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 ZNF626Q68DY1 528 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 ZNF880Q6PDB4 577 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 ABHD12Q8N2K0 398 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 PRR18Q8N4B5 295 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 OR52M1Q8NGK5 317 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 ZNF596Q8TC21 504 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 CMTM3Q96MX0 182 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 JMJD8Q96S16 334 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 HDHD3Q9BSH5 251 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-210ENST00000489961 ZMAT3Q9HA38 289 aaKnown RBP8.86□□□□□ -0.99
VPS13D-210ENST00000489961 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.86□□□□□ -0.99
VPS13D-210ENST00000489961 KCNK7Q9Y2U2 307 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 TBL2Q9Y4P3 447 aaKnown RBP8.86□□□□□ -0.99
VPS13D-210ENST00000489961 TRAV18A0A075B6X5 111 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 A0A0U1RQK1 487 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 ODF3BA8MYP8 253 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 F2RL2O00254 374 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 PITPNAQ00169 270 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 HMGN3Q15651 99 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 PNLIPRP3Q17RR3 467 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 ZNF260Q3ZCT1 412 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 MINOS1Q5TGZ0 78 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 HACD4Q5VWC8 232 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 BAIAP2L2Q6UXY1 529 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 SIGLECL1Q8N7X8 197 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 OR9G1Q8NH87 305 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 OR1L1Q8NH94 360 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 UBALD1Q8TB05 177 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 GALMQ96C23 342 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 ZNF286AQ9HBT8 521 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 Q9N2K0 584 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 GFOD1Q9NXC2 390 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 CCDC59Q9P031 241 aaKnown RBP8.85□□□□□ -0.99
VPS13D-210ENST00000489961 RSL24D1Q9UHA3 163 aaKnown RBP8.85□□□□□ -0.99
VPS13D-210ENST00000489961 SOX21Q9Y651 276 aaPredicted RBP8.85□□□□□ -0.99
VPS13D-210ENST00000489961 MINOS1-NBL1R4GNA1 71 aa8.85□□□□□ -0.99
VPS13D-210ENST00000489961 MDFIC2A0A1B0GVS7 189 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 SMIM31A0A1B0GVY4 71 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 ZNF701M0R085 212 aaPredicted RBP8.84□□□□□ -0.99
VPS13D-210ENST00000489961 XRCC3O43542 346 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 APOA1P02647 267 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 FCGR3AP08637 254 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 HTR1DP28221 377 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 MNDAP41218 407 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 GNG2P59768 71 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 HILS1P60008 231 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 HLA-DRB3P79483 266 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 HTD2P86397 168 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 BAMBIQ13145 260 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 TUSC1Q2TAM9 212 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 Q3ZCU0 254 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 TMEM69Q5SWH9 247 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 Q6YL49 198 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 PRIMA1Q86XR5 153 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 BEND2Q8NDZ0 799 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 DYNC2LI1Q8TCX1 351 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 LEAP2Q969E1 77 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 CREB3L1Q96BA8 519 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 MALSU1Q96EH3 234 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 ZNF48Q96MX3 618 aaPredicted RBP8.84□□□□□ -0.99
VPS13D-210ENST00000489961 PRDM13Q9H4Q3 707 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 OR2S2Q9NQN1 319 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 NDUFA13Q9P0J0 144 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 GNG12Q9UBI6 72 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 JPT1Q9UK76 154 aa8.84□□□□□ -0.99
VPS13D-210ENST00000489961 AMMECR1Q9Y4X0 333 aaPredicted RBP8.84□□□□□ -0.99
VPS13D-210ENST00000489961 ANK3Q12955 4377 aaKnown RBP8.83□□□□□ -1
VPS13D-210ENST00000489961 IGHV3-43A0A0B4J1X8 118 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 TMEM235A6NFC5 223 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 FAM25AB3EWG3 89 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 FAM25CB3EWG5 89 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 FAM25GB3EWG6 89 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 TRDCB7Z8K6 153 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 J3QR06 171 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 HPGDSO60760 199 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 RGS11O94810 467 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 IGLV1-47P01700 117 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 IGHV3-7P01780 117 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 EIF4EP06730 217 aaKnown RBP8.83□□□□□ -1
VPS13D-210ENST00000489961 IGHV3-43DP0DP04 118 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 DTYMKP23919 212 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 CEACAM3P40198 252 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 KIR2DS4P43632 304 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 GNG10P50151 68 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 LOXL3P58215 753 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 KIR2DS1Q14954 304 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 HLA-DRB5Q30154 266 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 STEAP3Q658P3 488 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 Q6ZPA2 131 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 LHFPL4Q7Z7J7 247 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 LDLRAD3Q86YD5 345 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 IZUMO1Q8IYV9 350 aa8.83□□□□□ -1
VPS13D-210ENST00000489961 OR4P4Q8NGL7 312 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 259.2 ms