RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 IGLV2-18A0A075B6J9 118 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 H0YJX3 145 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 IFNA10P01566 189 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 EGR2P11161 476 aaPredicted RBP8.52□□□□□ -1.05
HDAC6-233ENST00000489352 ALOX5APP20292 161 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 MED22Q15528 200 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 POC5Q8NA72 575 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 BVESQ8NE79 360 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 NPBQ8NG41 125 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 THRSPQ92748 146 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 ARL11Q969Q4 196 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 C7orf26Q96N11 449 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 FBXL15Q9H469 300 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 MOB1AQ9H8S9 216 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 NEK6Q9HC98 313 aa8.52□□□□□ -1.05
HDAC6-233ENST00000489352 INTS9Q9NV88 658 aaKnown RBP8.52□□□□□ -1.05
HDAC6-233ENST00000489352 IGHV3-43A0A0B4J1X8 118 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 TRAV39A0A0B4J263 110 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 H3BUA1 57 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 FXYD1O00168 92 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 IFNA21P01568 189 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 IFNA17P01571 189 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 TRBV12-3P01733 135 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 IGHV3-43DP0DP04 118 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 FOLR2P14207 255 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 HCCSP53701 268 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 ACTR3P61158 418 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 RPS7P62081 194 aaKnown RBP8.51□□□□□ -1.05
HDAC6-233ENST00000489352 PDZK1IP1Q13113 114 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 METTL21CQ5VZV1 264 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 ZNF57Q68EA5 555 aaPredicted RBP8.51□□□□□ -1.05
HDAC6-233ENST00000489352 Q6P435 159 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 TMEM179BQ7Z7N9 219 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 UBE2DNLQ8IWF7 75 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 ZNF679Q8IYX0 411 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 OR5T1Q8NG75 326 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 OR8D4Q8NGM9 314 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 CLCC1Q96S66 551 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 ADI1Q9BV57 179 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 C11orf68Q9H3H3 251 aaKnown RBP8.51□□□□□ -1.05
HDAC6-233ENST00000489352 RHOFQ9HBH0 211 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 CMC2Q9NRP2 79 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 OR52A1Q9UKL2 312 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 MYCBP2O75592 4640 aa8.51□□□□□ -1.05
HDAC6-233ENST00000489352 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-233ENST00000489352 A0A1B0GTI1 187 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 LANCL1O43813 399 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 SCAF4O95104 1147 aaKnown RBP8.5□□□□□ -1.05
HDAC6-233ENST00000489352 NDUFA3O95167 84 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 VHLP40337 213 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 ODF4Q2M2E3 257 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 ZNF343Q6P1L6 599 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 RASSF6Q6ZTQ3 369 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 ELMOD2Q8IZ81 293 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 SLC38A6Q8IZM9 456 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 SYT8Q8NBV8 401 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 C7orf34Q96L11 122 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 CCDC140Q96MF4 163 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 NR1H4Q96RI1 486 aaPredicted RBP8.5□□□□□ -1.05
HDAC6-233ENST00000489352 CHST5Q9GZS9 411 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 SPAG4Q9NPE6 437 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 GFOD1Q9NXC2 390 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 SELENOKQ9Y6D0 94 aa8.5□□□□□ -1.05
HDAC6-233ENST00000489352 TRAV10A0A0B4J240 114 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 C2orf70A6NJV1 201 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 BBIP1A8MTZ0 92 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 LGALS9O00182 355 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 FCN1O00602 326 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 RRHO14718 337 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 SYT7O43581 403 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 APOL3O95236 402 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 RPL35AP18077 110 aaKnown RBP8.49□□□□□ -1.05
HDAC6-233ENST00000489352 PRKACBP22694 351 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 RRM2P31350 389 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 LGALS7P47929 136 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 ZNF137PP52743 207 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 LINC00205P59089 165 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 LIPEQ05469 1076 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 Q3ZCU0 254 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 COQ5Q5HYK3 327 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 OR11H2Q8NH07 326 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 ASB17Q8WXJ9 295 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 RFT1Q96AA3 541 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 MCUR1Q96AQ8 359 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 USMG5Q96IX5 58 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 TTTY10Q9BZA0 68 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 ARMC1Q9NVT9 282 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 GNG12Q9UBI6 72 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 SAMD4AQ9UPU9 718 aaKnown RBP8.49□□□□□ -1.05
HDAC6-233ENST00000489352 SNX5Q9Y5X3 404 aa8.49□□□□□ -1.05
HDAC6-233ENST00000489352 DEFB4AO15263 64 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 SLC31A2O15432 143 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 KDM4BO94953 1096 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 SOX14O95416 240 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 SCTP09683 121 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 FCGR2BP31994 310 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-233ENST00000489352 MAP2K4P45985 399 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 KCNJ3P48549 501 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 MICAQ29983 383 aa8.48□□□□□ -1.05
HDAC6-233ENST00000489352 RSBN1Q5VWQ0 802 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms