RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 FAM90A23PA8MXZ1 464 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 C12orf77C9JDV5 145 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 GAPDHP04406 335 aaKnown RBP18.25■□□□□ 0.51
COL9A3-213ENST00000489045 CDK1P06493 297 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 PF4V1P10720 104 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 INSL4Q14641 139 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 MOB3BQ86TA1 216 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 C8orf31Q8N9H6 132 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 OR4K15Q8NH41 348 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 Q96M66 194 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 UQCC2Q9BRT2 126 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 MND1Q9BWT6 205 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 DCLRE1BQ9H816 532 aa18.25■□□□□ 0.51
COL9A3-213ENST00000489045 NKX1-2Q9UD57 310 aaPredicted RBP18.25■□□□□ 0.51
COL9A3-213ENST00000489045 IGHV3-72A0A0B4J1Y9 119 aa18.24■□□□□ 0.51
COL9A3-213ENST00000489045 FGF16O43320 207 aa18.24■□□□□ 0.51
COL9A3-213ENST00000489045 VHLP40337 213 aa18.24■□□□□ 0.51
COL9A3-213ENST00000489045 GABPB1Q06547 395 aaPredicted RBP18.24■□□□□ 0.51
COL9A3-213ENST00000489045 KHDC1LQ5JSQ8 128 aa18.24■□□□□ 0.51
COL9A3-213ENST00000489045 C6orf183Q5T699 404 aa18.24■□□□□ 0.51
COL9A3-213ENST00000489045 FAM46BQ96A09 425 aa18.24■□□□□ 0.51
COL9A3-213ENST00000489045 CYYR1Q96J86 154 aa18.24■□□□□ 0.51
COL9A3-213ENST00000489045 PTGES3LE9PB15 166 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 SLC31A2O15432 143 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 SPINT2O43291 252 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 IL3RAP26951 378 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 GPR50Q13585 617 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 Q3ZCU0 254 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 ACSM3Q53FZ2 586 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 C6orf141Q5SZD1 244 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 FAM27D1Q5T7N8 215 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 RNLSQ5VYX0 342 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 SIGIRRQ6IA17 410 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 GAPTQ8N292 157 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 PRR18Q8N4B5 295 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 TMED9Q9BVK6 235 aa18.23■□□□□ 0.51
COL9A3-213ENST00000489045 UBE2QL1A1L167 161 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 PSMB11A5LHX3 300 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 SC5DO75845 299 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 HBZP02008 142 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 RCC1P18754 421 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-213ENST00000489045 CD33P20138 364 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 FUT3P21217 361 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 GP2P55259 537 aaKnown RBP18.22■□□□□ 0.51
COL9A3-213ENST00000489045 EBI3Q14213 229 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 UNQ9370/PRO34162Q6UXP9 181 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 IZUMO1Q8IYV9 350 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 MS4A15Q8N5U1 240 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 OR1L1Q8NH94 360 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 RTN4IP1Q8WWV3 396 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-213ENST00000489045 ST6GALNAC6Q969X2 333 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 PHF21AQ96BD5 680 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 EAF1Q96JC9 268 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-213ENST00000489045 NOL4LQ96MY1 436 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-213ENST00000489045 RAB9BQ9NP90 201 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 GNG12Q9UBI6 72 aa18.22■□□□□ 0.51
COL9A3-213ENST00000489045 LSM2Q9Y333 95 aaKnown RBP18.22■□□□□ 0.51
COL9A3-213ENST00000489045 CA11O75493 328 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 PF4P02776 101 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 GLAP06280 429 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 AQP4P55087 323 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 SPHARQ15513 63 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 TMEM30BQ3MIR4 351 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 TRAT1Q6PIZ9 186 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 SLC25A48Q6ZT89 311 aaKnown RBP18.21■□□□□ 0.51
COL9A3-213ENST00000489045 ZNF329Q86UD4 541 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 ZNF439Q8NDP4 499 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 OR10V1Q8NGI7 309 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 SGCDQ92629 289 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 CST11Q9H112 138 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 GHRLQ9UBU3 117 aa18.21■□□□□ 0.51
COL9A3-213ENST00000489045 SERPINE3A8MV23 424 aa18.2■□□□□ 0.5
COL9A3-213ENST00000489045 PDCD6O75340 191 aa18.2■□□□□ 0.5
COL9A3-213ENST00000489045 MPIG6BO95866 241 aa18.2■□□□□ 0.5
COL9A3-213ENST00000489045 RBM48Q5RL73 367 aaKnown RBP18.2■□□□□ 0.5
COL9A3-213ENST00000489045 REC114Q7Z4M0 266 aa18.2■□□□□ 0.5
COL9A3-213ENST00000489045 LRRTM1Q86UE6 522 aa18.2■□□□□ 0.5
COL9A3-213ENST00000489045 Q8N6K4 173 aa18.2■□□□□ 0.5
COL9A3-213ENST00000489045 WFDC9Q8NEX5 89 aa18.2■□□□□ 0.5
COL9A3-213ENST00000489045 CHPT1Q8WUD6 406 aa18.2■□□□□ 0.5
COL9A3-213ENST00000489045 NRG4Q8WWG1 115 aa18.2■□□□□ 0.5
COL9A3-213ENST00000489045 SCN3BQ9NY72 215 aa18.2■□□□□ 0.5
COL9A3-213ENST00000489045 H0YHG0 523 aa18.19■□□□□ 0.5
COL9A3-213ENST00000489045 IGLL1P15814 213 aa18.19■□□□□ 0.5
COL9A3-213ENST00000489045 ZNF134P52741 427 aa18.19■□□□□ 0.5
COL9A3-213ENST00000489045 MED22Q15528 200 aa18.19■□□□□ 0.5
COL9A3-213ENST00000489045 CT45A1Q5HYN5 189 aa18.19■□□□□ 0.5
COL9A3-213ENST00000489045 NKAPLQ5M9Q1 402 aa18.19■□□□□ 0.5
COL9A3-213ENST00000489045 SLC35E3Q7Z769 313 aa18.19■□□□□ 0.5
COL9A3-213ENST00000489045 OR2T10Q8NGZ9 312 aa18.19■□□□□ 0.5
COL9A3-213ENST00000489045 CT45A3Q8NHU0 189 aa18.19■□□□□ 0.5
COL9A3-213ENST00000489045 PHYHIPQ92561 330 aa18.19■□□□□ 0.5
COL9A3-213ENST00000489045 TAF9BQ9HBM6 251 aa18.19■□□□□ 0.5
COL9A3-213ENST00000489045 LINC00527Q9UJ94 153 aa18.19■□□□□ 0.5
COL9A3-213ENST00000489045 NCBP2LA6PVI3 153 aaKnown RBP18.18■□□□□ 0.5
COL9A3-213ENST00000489045 IGHG2P01859 326 aa18.18■□□□□ 0.5
COL9A3-213ENST00000489045 UBBP0CG47 229 aa18.18■□□□□ 0.5
COL9A3-213ENST00000489045 VSIG8P0DPA2 414 aa18.18■□□□□ 0.5
COL9A3-213ENST00000489045 ZNF137PP52743 207 aa18.18■□□□□ 0.5
COL9A3-213ENST00000489045 GLT8D1Q68CQ7 371 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms