RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 LPAR5Q9H1C0 372 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 DEFB127Q9H1M4 99 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 PPA2Q9H2U2 334 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 METTL8Q9H825 291 aaKnown RBP2.41□□□□□ -2.02
CALD1-221ENST00000489019 CDH20Q9HBT6 801 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 NGBQ9NPG2 151 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 TMEM38BQ9NVV0 291 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 EHFQ9NZC4 300 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 DUX4Q9UBX2 424 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 KCNN3Q9UGI6 736 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 ZNF391Q9UJN7 358 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 C14orf166Q9Y224 244 aaKnown RBP2.41□□□□□ -2.02
CALD1-221ENST00000489019 NPTNQ9Y639 398 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 U3KQ87 197 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 C5orf42Q9H799 3197 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 FER1L5A0AVI2 2057 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 PCNX3Q9H6A9 2034 aa2.41□□□□□ -2.02
CALD1-221ENST00000489019 RP1P56715 2156 aa2.4□□□□□ -2.02
CALD1-221ENST00000489019 A0A0A6YYD4 124 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 TRGV5A0A0B4J1U4 118 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 A0A0D9SG52 128 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 TEX13DA0A0J9YY54 714 aaPredicted RBP2.4□□□□□ -2.03
CALD1-221ENST00000489019 ZNF816-ZNF321PA0A0X1KG74 233 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 hCG_38984A0A1B0GV85 526 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 SPAARA0A1B0GVQ0 90 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 KANTRA0A1W2PQU2 76 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 C9orf170A2RU37 121 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 C5orf49A4QMS7 147 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 C5orf63A6NC05 138 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 DHRS7CA6NNS2 312 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ANKRD30BLA7E2S9 258 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ZNF850A8MQ14 1090 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ZNF724A8MTY0 619 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 SERPINE3A8MV23 424 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 MCRIP1C9JLW8 97 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 FAM90A26D6RGX4 464 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 SDCBPO00560 298 aaPredicted RBP2.4□□□□□ -2.03
CALD1-221ENST00000489019 ANGPTL7O43827 346 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 SSX5O60225 188 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 NME2P1O60361 137 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ZG16O60844 167 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 WDR1O75083 606 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 SFT2D2O95562 160 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ACTL6AO96019 429 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 IGLV3-1P01715 115 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 MELTFP08582 738 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ZNF735P0CB33 412 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 AREGP15514 252 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ZNF708P17019 499 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 CXCL2P19875 107 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 CRYGSP22914 178 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 CD82P27701 267 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 S100A11P31949 105 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 OTX1P32242 354 aaPredicted RBP2.4□□□□□ -2.03
CALD1-221ENST00000489019 ARR3P36575 388 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 RBMXP38159 391 aaKnown RBP2.4□□□□□ -2.03
CALD1-221ENST00000489019 GLP1RP43220 463 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 RBP2P50120 134 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 LHX2P50458 406 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 CCL11P51671 97 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 CLDN18P56856 261 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 UBA52P62987 128 aaKnown RBP2.4□□□□□ -2.03
CALD1-221ENST00000489019 DLK1P80370 383 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 QRFPP83859 136 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ZNF92Q03936 586 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 PPP1R1AQ13522 171 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 GK2Q14410 553 aaPredicted RBP2.4□□□□□ -2.03
CALD1-221ENST00000489019 SMCO1Q147U7 214 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ATXN7L3Q14CW9 347 aaPredicted RBP2.4□□□□□ -2.03
CALD1-221ENST00000489019 TGIF1Q15583 401 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 C3AR1Q16581 482 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 TAF9Q16594 264 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 MICBQ29980 383 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ABCA11PQ4W5N1 156 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 PABPC1L2AQ5JQF8 200 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 RIPPLY2Q5TAB7 128 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 TSPO2Q5TGU0 170 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 PRR27Q6MZM9 219 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 LPCAT3Q6P1A2 487 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ALKAL2Q6UX46 152 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 RFPL4BQ6ZWI9 263 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 TMUB2Q71RG4 321 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 C6orf201Q7Z4U5 140 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ZNF546Q86UE3 836 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 RTN4RL2Q86UN3 420 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 SLC25A42Q86VD7 318 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 COMMD7Q86VX2 200 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 HOGA1Q86XE5 327 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 LYPD6Q86Y78 171 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 OSR2Q8N2R0 312 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ARRDC1Q8N5I2 433 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 INO80EQ8NBZ0 244 aaPredicted RBP2.4□□□□□ -2.03
CALD1-221ENST00000489019 ADAD2Q8NCV1 583 aaKnown RBP2.4□□□□□ -2.03
CALD1-221ENST00000489019 TMEM104Q8NE00 496 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 ZNF680Q8NEM1 530 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 DMBX1Q8NFW5 382 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 OR5AP2Q8NGF4 316 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 OR13C8Q8NGS7 320 aa2.4□□□□□ -2.03
CALD1-221ENST00000489019 TERB2Q8NHR7 220 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms