RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 OR3A3P47888 321 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 DLX6P56179 175 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 DEFA1P59665 94 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 DEFA3P59666 94 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 ARPC4P59998 168 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 HTD2P86397 168 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 PAX2Q02962 417 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 LOXL1Q08397 574 aaPredicted RBP13.2□□□□□ -0.3
CLDN11-208ENST00000488989 TMEM30BQ3MIR4 351 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 IGSF11Q5DX21 431 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 ARRDC1Q8N5I2 433 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 OR10A7Q8NGE5 316 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 OR4D10Q8NGI6 311 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 ARL11Q969Q4 196 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 TOLLIPQ9H0E2 274 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 NECAP2Q9NVZ3 263 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 SLC2A8Q9NY64 477 aa13.2□□□□□ -0.3
CLDN11-208ENST00000488989 ASH1LQ9NR48 2969 aaKnown RBP13.19□□□□□ -0.3
CLDN11-208ENST00000488989 LOC105371242A0A075B767 164 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 TRBV6-7A0A0A0MS04 114 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 LINC00854A0A1B0GVQ3 168 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 CENPXA8MT69 81 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 SPINT2O43291 252 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 HEXAP06865 529 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 ZNF728P0DKX0 622 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 ZFP36P26651 326 aaKnown RBP13.19□□□□□ -0.3
CLDN11-208ENST00000488989 IL2RGP31785 369 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 BTCP35070 178 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 RFX2P48378 723 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 ZNF660Q6AZW8 331 aaPredicted RBP13.19□□□□□ -0.3
CLDN11-208ENST00000488989 FAM185AQ8N0U4 392 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 POC5Q8NA72 575 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 OR1L1Q8NH94 360 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 GALMQ96C23 342 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 KIRREL1Q96J84 757 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 ZNF714Q96N38 554 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 GAL3ST2Q9H3Q3 398 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 EHFQ9NZC4 300 aa13.19□□□□□ -0.3
CLDN11-208ENST00000488989 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.18□□□□□ -0.3
CLDN11-208ENST00000488989 PPIAL4CA0A0B4J2A2 164 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 C17orf98A8MV24 154 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 DISC1C4P0D8 188 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 FAM157AC9JC47 383 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 RBP4P02753 201 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 PPIAL4GP0DN37 164 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 OR5H8P0DN80 308 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 FAAP20Q6NZ36 180 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 DHRS11Q6UWP2 260 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 LHFPL1Q86WI0 220 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 C11orf42Q8N5U0 333 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 OR52M1Q8NGK5 317 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 OR56B4Q8NH76 319 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 GIMAP1Q8WWP7 306 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 SLC6A7Q99884 636 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 AKAP9Q99996 3911 aa13.18□□□□□ -0.3
CLDN11-208ENST00000488989 A0A1W2PPH5 198 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 MEX3AA1L020 520 aaKnown RBP13.17□□□□□ -0.3
CLDN11-208ENST00000488989 SDCBPO00560 298 aaPredicted RBP13.17□□□□□ -0.3
CLDN11-208ENST00000488989 TUSC2O75896 110 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 AMY2AP04746 511 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 IFNA6P05013 189 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 LIPFP07098 398 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 CCL3L1P16619 93 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 FPR2P25090 351 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 SLC6A1P30531 599 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 LOXL3P58215 753 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 LY6G6FQ5SQ64 297 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 MZT2BQ6NZ67 158 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 HEPN1Q6WQI6 88 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 Q96MF0 132 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 PRRT1Q99946 306 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 REG4Q9BYZ8 158 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 IDI2-AS1Q9NZ38 188 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 JPT1Q9UK76 154 aa13.17□□□□□ -0.3
CLDN11-208ENST00000488989 BAHCC1Q9P281 2608 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 IGHV2-70DA0A0C4DH43 119 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 ENSAO43768 121 aaKnown RBP13.16□□□□□ -0.3
CLDN11-208ENST00000488989 PTTG1O95997 202 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 ZNF782Q6ZMW2 699 aaPredicted RBP13.16□□□□□ -0.3
CLDN11-208ENST00000488989 C1orf122Q6ZSJ8 110 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 TMEM17Q86X19 198 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 H1FOOQ8IZA3 346 aaPredicted RBP13.16□□□□□ -0.3
CLDN11-208ENST00000488989 PRR18Q8N4B5 295 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 KIR3DL3Q8N743 410 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 DUSP18Q8NEJ0 188 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 OR51S1Q8NGJ8 323 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 OR10J5Q8NHC4 309 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 RFESDQ8TAC1 157 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 UBALD1Q8TB05 177 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 MCUBQ9NWR8 336 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 GFOD1Q9NXC2 390 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 OR1A1Q9P1Q5 309 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 SCP2D1Q9UJQ7 156 aa13.16□□□□□ -0.3
CLDN11-208ENST00000488989 CCDC168Q8NDH2 2452 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 M0R1W7 72 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 BET1O15155 118 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 YPEL1O60688 119 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 MMP23AO75900 390 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 ZBTB25P24278 435 aa13.15□□□□□ -0.3
CLDN11-208ENST00000488989 FCGR2CP31995 323 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms