RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 OR14J1Q9UGF5 321 aa10.78□□□□□ -0.68
CLIC4-202ENST00000488683 CSMD1Q96PZ7 3565 aa10.78□□□□□ -0.68
CLIC4-202ENST00000488683 PGLYRP1O75594 196 aaPredicted RBP10.78□□□□□ -0.68
CLIC4-202ENST00000488683 LYZL6O75951 148 aa10.78□□□□□ -0.68
CLIC4-202ENST00000488683 CDS2O95674 445 aa10.78□□□□□ -0.68
CLIC4-202ENST00000488683 GRPP07492 148 aa10.78□□□□□ -0.68
CLIC4-202ENST00000488683 VAMP2P63027 116 aa10.78□□□□□ -0.68
CLIC4-202ENST00000488683 ZNF343Q6P1L6 599 aa10.78□□□□□ -0.68
CLIC4-202ENST00000488683 MCEMP1Q8IX19 187 aa10.78□□□□□ -0.68
CLIC4-202ENST00000488683 TPRX1Q8N7U7 411 aa10.78□□□□□ -0.68
CLIC4-202ENST00000488683 RSG1Q9BU20 258 aa10.78□□□□□ -0.68
CLIC4-202ENST00000488683 HEATR1Q9H583 2144 aaKnown RBP10.77□□□□□ -0.69
CLIC4-202ENST00000488683 FGF8P55075 233 aaPredicted RBP10.77□□□□□ -0.69
CLIC4-202ENST00000488683 NMSQ5H8A3 153 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 ZNF826PQ6ZT77 177 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 SAXO1Q8IYX7 474 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 OR5P3Q8WZ94 311 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 HIST1H2AAQ96QV6 131 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 OR2J1Q9GZK6 312 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 KCNS2Q9ULS6 477 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 MMP24Q9Y5R2 645 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 ATP23Q9Y6H3 246 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 K7N7A8 449 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 CDIPTO14735 213 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 WNT9BO14905 357 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 HMGB3O15347 200 aaKnown RBP10.77□□□□□ -0.69
CLIC4-202ENST00000488683 AGFG2O95081 481 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 COX5BP10606 129 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 IDH3GP51553 393 aaPredicted RBP10.77□□□□□ -0.69
CLIC4-202ENST00000488683 PAX9P55771 341 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 MPV17LQ2QL34 196 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 FAM185AQ8N0U4 392 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 ZNF295-AS1Q8N0V1 137 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 RNASE11Q8TAA1 199 aaKnown RBP10.77□□□□□ -0.69
CLIC4-202ENST00000488683 SFT2D1Q8WV19 159 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 DLL3Q9NYJ7 618 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 SPRR3Q9UBC9 169 aa10.77□□□□□ -0.69
CLIC4-202ENST00000488683 RBM7Q9Y580 266 aaKnown RBP10.77□□□□□ -0.69
CLIC4-202ENST00000488683 WDR1O75083 606 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 TNFSF15O95150 251 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 IGKV1-39P01597 117 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 IGKV1D-39P04432 117 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 RND3P61587 244 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 OR5A2Q8NGI9 324 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 GPR146Q96CH1 333 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 KPTNQ9Y664 436 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 BSNQ9UPA5 3926 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 KIAA1324LA8MWY0 1029 aaPredicted RBP10.76□□□□□ -0.69
CLIC4-202ENST00000488683 UCP1P25874 307 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 SPINK9Q5DT21 86 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 SPSB3Q6PJ21 355 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 IL22RA1Q8N6P7 574 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 SMCO4Q9NRQ5 59 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 LYRM2Q9NU23 88 aaPredicted RBP10.76□□□□□ -0.69
CLIC4-202ENST00000488683 RYDENQ9NUL5 291 aaKnown RBP10.76□□□□□ -0.69
CLIC4-202ENST00000488683 COA4Q9NYJ1 87 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 TACC2O95359 2948 aa10.76□□□□□ -0.69
CLIC4-202ENST00000488683 METTL15P1P0C7V9 234 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 SULT1A1P50225 295 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 SRPXP78539 464 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 ARL16Q0P5N6 197 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 SRSF7Q16629 238 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLIC4-202ENST00000488683 SSX7Q7RTT5 188 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 THNSL2Q86YJ6 484 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 FAM58AQ8N1B3 248 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 NANPQ8TBE9 248 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 POM121Q96HA1 1249 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 KCNJ16Q9NPI9 418 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 ANKRD30BLA7E2S9 258 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 HSPA12AO43301 675 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 SLC34A2O95436 690 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 IGLV2-14P01704 120 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 IGHV3-13P01766 116 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 IGHV3-7P01780 117 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 ACAA1P09110 424 aaPredicted RBP10.75□□□□□ -0.69
CLIC4-202ENST00000488683 DEFA4P12838 97 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 CD59P13987 128 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 NQO2P16083 231 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 APLNRP35414 380 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 ARR3P36575 388 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 PLP2Q04941 152 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 OR10J5Q8NHC4 309 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 WDYHV1Q96HA8 205 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 PIEZO2Q9H5I5 2752 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 ROS1P08922 2347 aa10.75□□□□□ -0.69
CLIC4-202ENST00000488683 KIR2DS1A0A191URI9 304 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 DEGS1O15121 323 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 SP1P08047 785 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 ZNF883P0CG24 379 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 KIR2DS4P43632 304 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 ID3Q02535 119 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 CLN3Q13286 438 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 KIR2DS1Q14954 304 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 ZNF324BQ6AW86 544 aaPredicted RBP10.74□□□□□ -0.69
CLIC4-202ENST00000488683 ZNF808Q8N4W9 903 aaPredicted RBP10.74□□□□□ -0.69
CLIC4-202ENST00000488683 GPR87Q9BY21 358 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 BIN3Q9NQY0 253 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 CACNG5Q9UF02 275 aa10.74□□□□□ -0.69
CLIC4-202ENST00000488683 CDX4O14627 284 aaPredicted RBP10.74□□□□□ -0.69
CLIC4-202ENST00000488683 PITX3O75364 302 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms