RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 REC114Q7Z4M0 266 aa18.34■□□□□ 0.53
CUL4A-209ENST00000488558 TMEM104Q8NE00 496 aa18.34■□□□□ 0.53
CUL4A-209ENST00000488558 SELENOIQ9C0D9 397 aa18.34■□□□□ 0.53
CUL4A-209ENST00000488558 IGHV1-3A0A0C4DH29 117 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 TCRBV4S1A1TA0A5B7 111 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 C12orf77C9JDV5 145 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 SPINT2O43291 252 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 UBBP0CG47 229 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 C9orf152Q5JTZ5 239 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 SYT6Q5T7P8 510 aaPredicted RBP18.33■□□□□ 0.52
CUL4A-209ENST00000488558 UNQ9370/PRO34162Q6UXP9 181 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 WFDC9Q8NEX5 89 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 PHYHIPQ92561 330 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 MYDGFQ969H8 173 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 ST6GALNAC6Q969X2 333 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 CST11Q9H112 138 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 BANF2Q9H503 90 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 TRAPPC2LQ9UL33 140 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 PEX16Q9Y5Y5 336 aa18.33■□□□□ 0.52
CUL4A-209ENST00000488558 CRTAPO75718 401 aaPredicted RBP18.32■□□□□ 0.52
CUL4A-209ENST00000488558 PF4V1P10720 104 aa18.32■□□□□ 0.52
CUL4A-209ENST00000488558 FUT3P21217 361 aa18.32■□□□□ 0.52
CUL4A-209ENST00000488558 ZNF137PP52743 207 aa18.32■□□□□ 0.52
CUL4A-209ENST00000488558 GPR50Q13585 617 aa18.32■□□□□ 0.52
CUL4A-209ENST00000488558 C6orf141Q5SZD1 244 aa18.32■□□□□ 0.52
CUL4A-209ENST00000488558 ZNF554Q86TJ5 538 aa18.32■□□□□ 0.52
CUL4A-209ENST00000488558 LSM2Q9Y333 95 aaKnown RBP18.32■□□□□ 0.52
CUL4A-209ENST00000488558 A0A1W2PRX2 142 aa18.31■□□□□ 0.52
CUL4A-209ENST00000488558 PSMB11A5LHX3 300 aa18.31■□□□□ 0.52
CUL4A-209ENST00000488558 TXNL1O43396 289 aa18.31■□□□□ 0.52
CUL4A-209ENST00000488558 ACSM3Q53FZ2 586 aa18.31■□□□□ 0.52
CUL4A-209ENST00000488558 OXLD1Q5BKU9 147 aa18.31■□□□□ 0.52
CUL4A-209ENST00000488558 SLC25A48Q6ZT89 311 aaKnown RBP18.31■□□□□ 0.52
CUL4A-209ENST00000488558 Q8N6K4 173 aa18.31■□□□□ 0.52
CUL4A-209ENST00000488558 ZNF439Q8NDP4 499 aa18.31■□□□□ 0.52
CUL4A-209ENST00000488558 UBALD1Q8TB05 177 aa18.31■□□□□ 0.52
CUL4A-209ENST00000488558 CHPT1Q8WUD6 406 aa18.31■□□□□ 0.52
CUL4A-209ENST00000488558 RTN4IP1Q8WWV3 396 aaPredicted RBP18.31■□□□□ 0.52
CUL4A-209ENST00000488558 SCN3BQ9NY72 215 aa18.31■□□□□ 0.52
CUL4A-209ENST00000488558 IGHV3-43A0A0B4J1X8 118 aa18.3■□□□□ 0.52
CUL4A-209ENST00000488558 ANKRD65E5RJM6 399 aa18.3■□□□□ 0.52
CUL4A-209ENST00000488558 PDCD6O75340 191 aa18.3■□□□□ 0.52
CUL4A-209ENST00000488558 IGHV3-43DP0DP04 118 aa18.3■□□□□ 0.52
CUL4A-209ENST00000488558 GABPB1Q06547 395 aaPredicted RBP18.3■□□□□ 0.52
CUL4A-209ENST00000488558 SPHARQ15513 63 aa18.3■□□□□ 0.52
CUL4A-209ENST00000488558 STEAP3Q658P3 488 aa18.3■□□□□ 0.52
CUL4A-209ENST00000488558 SIGIRRQ6IA17 410 aa18.3■□□□□ 0.52
CUL4A-209ENST00000488558 C10orf99Q6UWK7 81 aa18.3■□□□□ 0.52
CUL4A-209ENST00000488558 MOB3BQ86TA1 216 aa18.3■□□□□ 0.52
CUL4A-209ENST00000488558 OR4K15Q8NH41 348 aa18.3■□□□□ 0.52
CUL4A-209ENST00000488558 EAF1Q96JC9 268 aaPredicted RBP18.3■□□□□ 0.52
CUL4A-209ENST00000488558 MBNL3Q9NUK0 354 aaKnown RBP18.3■□□□□ 0.52
CUL4A-209ENST00000488558 GNG12Q9UBI6 72 aa18.3■□□□□ 0.52
CUL4A-209ENST00000488558 H0YHG0 523 aa18.29■□□□□ 0.52
CUL4A-209ENST00000488558 IGHG2P01859 326 aa18.29■□□□□ 0.52
CUL4A-209ENST00000488558 HBZP02008 142 aa18.29■□□□□ 0.52
CUL4A-209ENST00000488558 CD1BP29016 333 aa18.29■□□□□ 0.52
CUL4A-209ENST00000488558 REG1BP48304 166 aa18.29■□□□□ 0.52
CUL4A-209ENST00000488558 GP2P55259 537 aaKnown RBP18.29■□□□□ 0.52
CUL4A-209ENST00000488558 C1orf100Q5SVJ3 147 aa18.29■□□□□ 0.52
CUL4A-209ENST00000488558 GLT8D1Q68CQ7 371 aa18.29■□□□□ 0.52
CUL4A-209ENST00000488558 LRRTM1Q86UE6 522 aa18.29■□□□□ 0.52
CUL4A-209ENST00000488558 TGIF2LXQ8IUE1 241 aa18.29■□□□□ 0.52
CUL4A-209ENST00000488558 OR2T10Q8NGZ9 312 aa18.29■□□□□ 0.52
CUL4A-209ENST00000488558 NKX1-2Q9UD57 310 aaPredicted RBP18.29■□□□□ 0.52
CUL4A-209ENST00000488558 NOTCH3Q9UM47 2321 aa18.28■□□□□ 0.52
CUL4A-209ENST00000488558 PTGES3LE9PB15 166 aa18.28■□□□□ 0.52
CUL4A-209ENST00000488558 RCC1P18754 421 aaPredicted RBP18.28■□□□□ 0.52
CUL4A-209ENST00000488558 CD33P20138 364 aa18.28■□□□□ 0.52
CUL4A-209ENST00000488558 SLC35A2P78381 396 aa18.28■□□□□ 0.52
CUL4A-209ENST00000488558 HNF4GQ14541 408 aa18.28■□□□□ 0.52
CUL4A-209ENST00000488558 INSL4Q14641 139 aa18.28■□□□□ 0.52
CUL4A-209ENST00000488558 IRF3Q14653 427 aa18.28■□□□□ 0.52
CUL4A-209ENST00000488558 RBM48Q5RL73 367 aaKnown RBP18.28■□□□□ 0.52
CUL4A-209ENST00000488558 SLC35E3Q7Z769 313 aa18.28■□□□□ 0.52
CUL4A-209ENST00000488558 FAM46BQ96A09 425 aa18.28■□□□□ 0.52
CUL4A-209ENST00000488558 PHF21AQ96BD5 680 aa18.28■□□□□ 0.52
CUL4A-209ENST00000488558 LIN7CQ9NUP9 197 aaKnown RBP18.28■□□□□ 0.52
CUL4A-209ENST00000488558 NECAP2Q9NVZ3 263 aa18.28■□□□□ 0.52
CUL4A-209ENST00000488558 SERPINE3A8MV23 424 aa18.27■□□□□ 0.52
CUL4A-209ENST00000488558 SLC31A2O15432 143 aa18.27■□□□□ 0.52
CUL4A-209ENST00000488558 PF4P02776 101 aa18.27■□□□□ 0.52
CUL4A-209ENST00000488558 AQP4P55087 323 aa18.27■□□□□ 0.52
CUL4A-209ENST00000488558 MED22Q15528 200 aa18.27■□□□□ 0.52
CUL4A-209ENST00000488558 FAM27D1Q5T7N8 215 aa18.27■□□□□ 0.52
CUL4A-209ENST00000488558 FAM53AQ6NSI3 398 aaPredicted RBP18.27■□□□□ 0.52
CUL4A-209ENST00000488558 FOXRED2Q8IWF2 684 aa18.27■□□□□ 0.52
CUL4A-209ENST00000488558 OR8H1Q8NGG4 311 aa18.27■□□□□ 0.52
CUL4A-209ENST00000488558 OR1L1Q8NH94 360 aa18.27■□□□□ 0.52
CUL4A-209ENST00000488558 TMED9Q9BVK6 235 aa18.27■□□□□ 0.52
CUL4A-209ENST00000488558 TAF9BQ9HBM6 251 aa18.27■□□□□ 0.52
CUL4A-209ENST00000488558 KCNIP1Q9NZI2 227 aa18.27■□□□□ 0.52
CUL4A-209ENST00000488558 DNAH3Q8TD57 4116 aa18.26■□□□□ 0.51
CUL4A-209ENST00000488558 UBE2QL1A1L167 161 aa18.26■□□□□ 0.51
CUL4A-209ENST00000488558 MPIG6BO95866 241 aa18.26■□□□□ 0.51
CUL4A-209ENST00000488558 UCHL1P09936 223 aa18.26■□□□□ 0.51
CUL4A-209ENST00000488558 VSIG8P0DPA2 414 aa18.26■□□□□ 0.51
CUL4A-209ENST00000488558 CD37P11049 281 aa18.26■□□□□ 0.51
CUL4A-209ENST00000488558 SLC6A1P30531 599 aa18.26■□□□□ 0.51
CUL4A-209ENST00000488558 VHLP40337 213 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms