RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 GALR1P47211 349 aa12.21□□□□□ -0.45
RER1-207ENST00000488353 ERVS71-1P61550 626 aa12.21□□□□□ -0.45
RER1-207ENST00000488353 KCNMB1Q16558 191 aa12.21□□□□□ -0.45
RER1-207ENST00000488353 MRGPRGQ86SM5 289 aa12.21□□□□□ -0.45
RER1-207ENST00000488353 TMEM37Q8WXS4 190 aa12.21□□□□□ -0.45
RER1-207ENST00000488353 C10orf35Q96D05 121 aa12.21□□□□□ -0.45
RER1-207ENST00000488353 C19orf25Q9UFG5 118 aaPredicted RBP12.21□□□□□ -0.45
RER1-207ENST00000488353 RNF150Q9ULK6 438 aa12.21□□□□□ -0.45
RER1-207ENST00000488353 IGLV3-32A0A0A0MS00 114 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 CLEC18AA5D8T8 446 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 ADAM20O43506 726 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 CHST1O43916 411 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 NPSP0C0P6 89 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 GZMHP20718 246 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 AADACP22760 399 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 TMEM241Q24JQ0 296 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 ZNF774Q6NX45 483 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 LCN15Q6UWW0 184 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 CENPVQ7Z7K6 275 aaPredicted RBP12.2□□□□□ -0.46
RER1-207ENST00000488353 NECAP1Q8NC96 275 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 CLEC18CQ8NCF0 446 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 UCN2Q96RP3 112 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 SMIM7Q9BQ49 75 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 Q9N2K0 584 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 CEBPZOSA8MTT3 80 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 H7BYZ3 331 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 MSR1P21757 451 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 RPL29P47914 159 aaKnown RBP12.2□□□□□ -0.46
RER1-207ENST00000488353 PCOLCEQ15113 449 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 RSPO1Q2MKA7 263 aaPredicted RBP12.2□□□□□ -0.46
RER1-207ENST00000488353 BSXQ3C1V8 233 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 CYP2G1PQ6ZSU1 146 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 SELENOHQ8IZQ5 122 aaKnown RBP12.2□□□□□ -0.46
RER1-207ENST00000488353 AGBL5Q8NDL9 886 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 SIGLEC12Q96PQ1 595 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 AGMATQ9BSE5 352 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 ZNF581Q9P0T4 197 aa12.2□□□□□ -0.46
RER1-207ENST00000488353 DUXBA0A1W2PPF3 345 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 NTN3O00634 580 aaPredicted RBP12.19□□□□□ -0.46
RER1-207ENST00000488353 ANGPTL7O43827 346 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 CER1O95813 267 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 PPYP01298 95 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 IFNA1P01562 189 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 UMODP07911 640 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 OR10J1P30954 320 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 ELLP55199 621 aaPredicted RBP12.19□□□□□ -0.46
RER1-207ENST00000488353 ENDOGQ14249 297 aaKnown RBP12.19□□□□□ -0.46
RER1-207ENST00000488353 IL11RAQ14626 422 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 ACTL10Q5JWF8 245 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 PEAR1Q5VY43 1037 aaPredicted RBP12.19□□□□□ -0.46
RER1-207ENST00000488353 GBGT1Q8N5D6 347 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 GJC3Q8NFK1 279 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 ZNF837Q96EG3 531 aaPredicted RBP12.19□□□□□ -0.46
RER1-207ENST00000488353 PCGF1Q9BSM1 259 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 FUT9Q9Y231 359 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 POLR3KQ9Y2Y1 108 aaPredicted RBP12.19□□□□□ -0.46
RER1-207ENST00000488353 MRPS18CQ9Y3D5 142 aaKnown RBP12.19□□□□□ -0.46
RER1-207ENST00000488353 CHCHD2Q9Y6H1 151 aaPredicted RBP12.19□□□□□ -0.46
RER1-207ENST00000488353 TP53I11O14683 189 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 VDAC1P21796 283 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 NPBWR2P48146 333 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 EXT1Q16394 746 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 ACSF3Q4G176 576 aaPredicted RBP12.19□□□□□ -0.46
RER1-207ENST00000488353 OR2AE1Q8NHA4 323 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 OPN3Q9H1Y3 402 aaPredicted RBP12.19□□□□□ -0.46
RER1-207ENST00000488353 PLEK2Q9NYT0 353 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 NAGKQ9UJ70 344 aa12.19□□□□□ -0.46
RER1-207ENST00000488353 SPRY1O43609 319 aaPredicted RBP12.18□□□□□ -0.46
RER1-207ENST00000488353 HRASP01112 189 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 HLA-HP01893 362 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 FGF8P55075 233 aaPredicted RBP12.18□□□□□ -0.46
RER1-207ENST00000488353 MRPS34P82930 218 aaKnown RBP12.18□□□□□ -0.46
RER1-207ENST00000488353 SNAI3Q3KNW1 292 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 RAET1LQ5VY80 246 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 BRICD5Q6PL45 260 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 BTNL3Q6UXE8 466 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 ZNF705AQ6ZN79 300 aaPredicted RBP12.18□□□□□ -0.46
RER1-207ENST00000488353 TBC1D26Q86UD7 250 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 FADS6Q8N9I5 356 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 SCGB1C1Q8TD33 95 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 DYRK2Q92630 601 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 ZNF845Q96IR2 970 aaPredicted RBP12.18□□□□□ -0.46
RER1-207ENST00000488353 PLSCR2Q9NRY7 297 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 A0A1W2PPQ1 181 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 NPIPA2E9PIF3 369 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 NPIPA3F8WFD2 350 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 KLF7O75840 302 aaPredicted RBP12.18□□□□□ -0.46
RER1-207ENST00000488353 GNRHRP30968 328 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 GNB2P62879 340 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 NMSQ5H8A3 153 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 KIAA2026Q5HYC2 2103 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 Q6ZSR3 168 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 C20orf196Q8IYI0 205 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 CISD2Q8N5K1 135 aaKnown RBP12.18□□□□□ -0.46
RER1-207ENST00000488353 SPSB1Q96BD6 273 aa12.18□□□□□ -0.46
RER1-207ENST00000488353 M0R135 149 aa12.17□□□□□ -0.46
RER1-207ENST00000488353 CNN1P51911 297 aaKnown RBP12.17□□□□□ -0.46
RER1-207ENST00000488353 PAX9P55771 341 aa12.17□□□□□ -0.46
RER1-207ENST00000488353 MRPS11P82912 194 aaKnown RBP12.17□□□□□ -0.46
RER1-207ENST00000488353 OR8B8Q15620 311 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms