RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 CYYR1Q96J86 154 aa15.29■□□□□ 0.04
CD55-209ENST00000488171 NOL4LQ96MY1 436 aaPredicted RBP15.29■□□□□ 0.04
CD55-209ENST00000488171 BANF2Q9H503 90 aa15.29■□□□□ 0.04
CD55-209ENST00000488171 FKBP14Q9NWM8 211 aa15.29■□□□□ 0.04
CD55-209ENST00000488171 NOTCH3Q9UM47 2321 aa15.29■□□□□ 0.04
CD55-209ENST00000488171 IGHV3-72A0A0B4J1Y9 119 aa15.28■□□□□ 0.04
CD55-209ENST00000488171 MCRIP1C9JLW8 97 aa15.28■□□□□ 0.04
CD55-209ENST00000488171 SLC31A2O15432 143 aa15.28■□□□□ 0.04
CD55-209ENST00000488171 SYT6Q5T7P8 510 aaPredicted RBP15.28■□□□□ 0.04
CD55-209ENST00000488171 RAB12Q6IQ22 244 aa15.28■□□□□ 0.04
CD55-209ENST00000488171 MOB3BQ86TA1 216 aa15.28■□□□□ 0.04
CD55-209ENST00000488171 IZUMO1Q8IYV9 350 aa15.28■□□□□ 0.04
CD55-209ENST00000488171 ZNF439Q8NDP4 499 aa15.28■□□□□ 0.04
CD55-209ENST00000488171 BPIFB6Q8NFQ5 453 aa15.28■□□□□ 0.04
CD55-209ENST00000488171 OR4K15Q8NH41 348 aa15.28■□□□□ 0.04
CD55-209ENST00000488171 MRAPQ8TCY5 172 aa15.28■□□□□ 0.04
CD55-209ENST00000488171 EAF1Q96JC9 268 aaPredicted RBP15.28■□□□□ 0.04
CD55-209ENST00000488171 ETAA1Q9NY74 926 aa15.28■□□□□ 0.04
CD55-209ENST00000488171 IGHG2P01859 326 aa15.27■□□□□ 0.04
CD55-209ENST00000488171 MGMTP16455 207 aa15.27■□□□□ 0.04
CD55-209ENST00000488171 VHLP40337 213 aa15.27■□□□□ 0.04
CD55-209ENST00000488171 Q3ZCU0 254 aa15.27■□□□□ 0.04
CD55-209ENST00000488171 SIGIRRQ6IA17 410 aa15.27■□□□□ 0.04
CD55-209ENST00000488171 Q8N6K4 173 aa15.27■□□□□ 0.04
CD55-209ENST00000488171 CHPT1Q8WUD6 406 aa15.27■□□□□ 0.04
CD55-209ENST00000488171 RTN4IP1Q8WWV3 396 aaPredicted RBP15.27■□□□□ 0.04
CD55-209ENST00000488171 Q96M66 194 aa15.27■□□□□ 0.04
CD55-209ENST00000488171 SELENOIQ9C0D9 397 aa15.27■□□□□ 0.04
CD55-209ENST00000488171 LINC00527Q9UJ94 153 aa15.27■□□□□ 0.04
CD55-209ENST00000488171 TRAPPC2LQ9UL33 140 aa15.27■□□□□ 0.04
CD55-209ENST00000488171 PEX16Q9Y5Y5 336 aa15.27■□□□□ 0.04
CD55-209ENST00000488171 DNAH3Q8TD57 4116 aa15.27■□□□□ 0.03
CD55-209ENST00000488171 FAM90A10PA6NDY2 464 aa15.26■□□□□ 0.03
CD55-209ENST00000488171 FAM90A7PA6NKC0 464 aa15.26■□□□□ 0.03
CD55-209ENST00000488171 SERPINE3A8MV23 424 aa15.26■□□□□ 0.03
CD55-209ENST00000488171 FAM90A23PA8MXZ1 464 aa15.26■□□□□ 0.03
CD55-209ENST00000488171 SC5DO75845 299 aa15.26■□□□□ 0.03
CD55-209ENST00000488171 ZNF134P52741 427 aa15.26■□□□□ 0.03
CD55-209ENST00000488171 SLC35A2P78381 396 aa15.26■□□□□ 0.03
CD55-209ENST00000488171 INSL4Q14641 139 aa15.26■□□□□ 0.03
CD55-209ENST00000488171 SLC25A48Q6ZT89 311 aaKnown RBP15.26■□□□□ 0.03
CD55-209ENST00000488171 NKAIN3Q8N8D7 197 aa15.26■□□□□ 0.03
CD55-209ENST00000488171 TFAP2CQ92754 450 aa15.26■□□□□ 0.03
CD55-209ENST00000488171 LINC01548A6NM66 108 aa15.25■□□□□ 0.03
CD55-209ENST00000488171 SPINT2O43291 252 aa15.25■□□□□ 0.03
CD55-209ENST00000488171 CRTAPO75718 401 aaPredicted RBP15.25■□□□□ 0.03
CD55-209ENST00000488171 HBZP02008 142 aa15.25■□□□□ 0.03
CD55-209ENST00000488171 RCC1P18754 421 aaPredicted RBP15.25■□□□□ 0.03
CD55-209ENST00000488171 ZNF137PP52743 207 aa15.25■□□□□ 0.03
CD55-209ENST00000488171 GP2P55259 537 aaKnown RBP15.25■□□□□ 0.03
CD55-209ENST00000488171 C6orf183Q5T699 404 aa15.25■□□□□ 0.03
CD55-209ENST00000488171 ETV3LQ6ZN32 361 aa15.25■□□□□ 0.03
CD55-209ENST00000488171 SLC35E3Q7Z769 313 aa15.25■□□□□ 0.03
CD55-209ENST00000488171 OR2T10Q8NGZ9 312 aa15.25■□□□□ 0.03
CD55-209ENST00000488171 OR1L1Q8NH94 360 aa15.25■□□□□ 0.03
CD55-209ENST00000488171 RCC1LQ96I51 464 aaKnown RBP15.25■□□□□ 0.03
CD55-209ENST00000488171 UQCC2Q9BRT2 126 aa15.25■□□□□ 0.03
CD55-209ENST00000488171 ZNF736B4DX44 427 aaPredicted RBP15.24■□□□□ 0.03
CD55-209ENST00000488171 FUT3P21217 361 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 IL3RAP26951 378 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 MAPK3P27361 379 aaPredicted RBP15.24■□□□□ 0.03
CD55-209ENST00000488171 CD1BP29016 333 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 RPL23AP62750 156 aaKnown RBP15.24■□□□□ 0.03
CD55-209ENST00000488171 TMEM30BQ3MIR4 351 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 CT45A1Q5HYN5 189 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 UNQ9370/PRO34162Q6UXP9 181 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 C18orf65Q6ZTR6 163 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 TGIF2LXQ8IUE1 241 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 STPG2Q8N412 459 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 PRR18Q8N4B5 295 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 LINC00482Q8N8I6 264 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 Q8N9W7 124 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 OR10V1Q8NGI7 309 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 CT45A3Q8NHU0 189 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 THRSPQ92748 146 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 RBMXL1Q96E39 390 aaKnown RBP15.24■□□□□ 0.03
CD55-209ENST00000488171 PLSCR3Q9NRY6 295 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 GNG12Q9UBI6 72 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 ERGIC3Q9Y282 383 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 UBE2QL1A1L167 161 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 NCBP2LA6PVI3 153 aaKnown RBP15.24■□□□□ 0.03
CD55-209ENST00000488171 CA11O75493 328 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 GLAP06280 429 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 CDK1P06493 297 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 FAM27D1Q5T7N8 215 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 RNLSQ5VYX0 342 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 TRAT1Q6PIZ9 186 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 OR2W3Q7Z3T1 314 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 FAM46BQ96A09 425 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 ABCG5Q9H222 651 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 RAB9BQ9NP90 201 aa15.24■□□□□ 0.03
CD55-209ENST00000488171 MBNL3Q9NUK0 354 aaKnown RBP15.24■□□□□ 0.03
CD55-209ENST00000488171 LIN7CQ9NUP9 197 aaKnown RBP15.24■□□□□ 0.03
CD55-209ENST00000488171 ANKRD65E5RJM6 399 aa15.23■□□□□ 0.03
CD55-209ENST00000488171 MOSP00540 346 aa15.23■□□□□ 0.03
CD55-209ENST00000488171 GPR12P47775 334 aa15.23■□□□□ 0.03
CD55-209ENST00000488171 GPR50Q13585 617 aa15.23■□□□□ 0.03
CD55-209ENST00000488171 ACSM3Q53FZ2 586 aa15.23■□□□□ 0.03
CD55-209ENST00000488171 C5orf24Q7Z6I8 188 aa15.23■□□□□ 0.03
CD55-209ENST00000488171 FOXRED2Q8IWF2 684 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms