RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 ARL11Q969Q4 196 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 HDHD3Q9BSH5 251 aaPredicted RBP8.72□□□□□ -1.01
TOP3B-216ENST00000487485 HEXA-AS1Q9H8Q6 139 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.72□□□□□ -1.01
TOP3B-216ENST00000487485 MBNL3Q9NUK0 354 aaKnown RBP8.72□□□□□ -1.01
TOP3B-216ENST00000487485 IDI2-AS1Q9NZ38 188 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 KCNIP1Q9NZI2 227 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 CCDC59Q9P031 241 aaKnown RBP8.72□□□□□ -1.01
TOP3B-216ENST00000487485 ELF5Q9UKW6 265 aaPredicted RBP8.72□□□□□ -1.01
TOP3B-216ENST00000487485 NUP50Q9UKX7 468 aa8.72□□□□□ -1.01
TOP3B-216ENST00000487485 TRBV6-6A0A0A6YYG2 114 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 TMEM235A6NFC5 223 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 C12orf77C9JDV5 145 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 NPIPB11E5RHQ5 1161 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 C15orf65H3BRN8 121 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 CTDSP2O14595 271 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 RGS5O15539 181 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 XRCC3O43542 346 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 GSTP1P09211 210 aaKnown RBP8.71□□□□□ -1.02
TOP3B-216ENST00000487485 ELK1P19419 428 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 GDNFP39905 211 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 UBE2E1P51965 193 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 GUCA2AQ02747 115 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 PRR31Q5SQ13 230 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 HACD4Q5VWC8 232 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 FOXB2Q5VYV0 432 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 RUSC1-AS1Q66K80 236 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 HCP5Q6MZN7 132 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 ZNF880Q6PDB4 577 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 TRAT1Q6PIZ9 186 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 BAIAP2L2Q6UXY1 529 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 BRD3OSQ6XYD6 125 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 Q6ZPA2 131 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 C5orf24Q7Z6I8 188 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 IZUMO1Q8IYV9 350 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 PNKDQ8N490 385 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 PRR18Q8N4B5 295 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 OR13D1Q8NGV5 346 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 UBALD1Q8TB05 177 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 ZNF418Q8TF45 676 aaPredicted RBP8.71□□□□□ -1.02
TOP3B-216ENST00000487485 DCUN1D5Q9BTE7 237 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 SLIRPQ9GZT3 109 aaKnown RBP8.71□□□□□ -1.02
TOP3B-216ENST00000487485 LINC00574Q9H8X3 128 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 TAF9BQ9HBM6 251 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 C12orf4Q9NQ89 552 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 SESN1Q9Y6P5 492 aa8.71□□□□□ -1.02
TOP3B-216ENST00000487485 IGHV1-69DA0A0B4J2H0 117 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 A0A1W2PRD5 423 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 A0A1W2PRF3 423 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 A0A1W2PRM7 423 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 FAM172BPA6NC97 362 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 POM121CA8CG34 1229 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 FAM25AB3EWG3 89 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 FAM25CB3EWG5 89 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 FAM25GB3EWG6 89 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 TRIM77I1YAP6 450 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 SPINT2O43291 252 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 IGHV1-69P01742 117 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 EPHA1P21709 976 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 COX7A1P24310 79 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 NFYBP25208 207 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 TALDO1P37837 337 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 BPIFB3P59826 476 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 HILS1P60008 231 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 LTC4SQ16873 150 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 PNLIPRP3Q17RR3 467 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 AWAT1Q58HT5 328 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 TMEM69Q5SWH9 247 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 ZNF554Q86TJ5 538 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 OR10A7Q8NGE5 316 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 C22orf15Q8WYQ4 148 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 KIRREL1Q96J84 757 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 SUCNR1Q9BXA5 334 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 MS4A7Q9GZW8 240 aaPredicted RBP8.7□□□□□ -1.02
TOP3B-216ENST00000487485 TMEM133Q9H2Q1 129 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 AUNIPQ9H7T9 357 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 Q9N2K0 584 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 RAB9BQ9NP90 201 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 ZNF69Q9UC07 566 aa8.7□□□□□ -1.02
TOP3B-216ENST00000487485 IGHV2-26A0A0B4J1V2 119 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 IGHV3-43A0A0B4J1X8 118 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 A6NHS1 94 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 F2RL2O00254 374 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 SDCBPO00560 298 aaPredicted RBP8.69□□□□□ -1.02
TOP3B-216ENST00000487485 NPFFO15130 113 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 HBZP02008 142 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 MELTFP08582 738 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 FCGR3AP08637 254 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 IGHV3-43DP0DP04 118 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 PTHLHP12272 177 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 FPR2P25090 351 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 MNDAP41218 407 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 TAS2R20P59543 309 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 GNG2P59768 71 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 PITPNAQ00169 270 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 SCGB2A2Q13296 93 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 HMGN3Q15651 99 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 C9orf139Q6ZV77 190 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 MOB1BQ7L9L4 216 aa8.69□□□□□ -1.02
TOP3B-216ENST00000487485 LAX1Q8IWV1 398 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms