RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 HOXA6P31267 233 aa6.65□□□□□ -1.34
COL6A4P1-202ENST00000487147 QRFPP83859 136 aa6.65□□□□□ -1.34
COL6A4P1-202ENST00000487147 COL10A1Q03692 680 aa6.65□□□□□ -1.34
COL6A4P1-202ENST00000487147 NUFIP2Q7Z417 695 aaKnown RBP6.65□□□□□ -1.34
COL6A4P1-202ENST00000487147 DMRTC2Q8IXT2 367 aaPredicted RBP6.65□□□□□ -1.34
COL6A4P1-202ENST00000487147 ZNF439Q8NDP4 499 aa6.65□□□□□ -1.34
COL6A4P1-202ENST00000487147 CLDND2Q8NHS1 167 aa6.65□□□□□ -1.34
COL6A4P1-202ENST00000487147 EDARADDQ8WWZ3 215 aa6.65□□□□□ -1.34
COL6A4P1-202ENST00000487147 MRGPRFQ96AM1 343 aa6.65□□□□□ -1.34
COL6A4P1-202ENST00000487147 TM2D1Q9BX74 207 aa6.65□□□□□ -1.34
COL6A4P1-202ENST00000487147 C11orf94C9JXX5 98 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 LMO7DNF2Z398 122 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 CXCL13O43927 109 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 PAGE4O60829 102 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 NPIPB7O75200 414 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 NXPH2O95156 264 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 RNF144BQ7Z419 303 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 FAM89BQ8N5H3 189 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 KLHDC1Q8N7A1 406 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 OR4X1Q8NH49 305 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 RNF166Q96A37 237 aaPredicted RBP6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 CIB3Q96Q77 187 aaPredicted RBP6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 HIPK2Q9H2X6 1198 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 RBKSQ9H477 322 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 MANBALQ9NQG1 85 aa6.65□□□□□ -1.35
COL6A4P1-202ENST00000487147 IGKV1-9A0A0C4DH69 117 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 C5orf49A4QMS7 147 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 SIRPB1O00241 398 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 POU2F2P09086 479 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 SNRPCP09234 159 aaKnown RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 EN2P19622 333 aaPredicted RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 OTX2P32243 289 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 OR3A1P47881 315 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 VEGFBP49765 207 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 PTTG1IPP53801 180 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 UCP3P55916 312 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 PHYHD1Q5SRE7 291 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 SYT13Q7L8C5 426 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 ANKRD37Q7Z713 158 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 SELENOHQ8IZQ5 122 aaKnown RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 SLC22A18ASQ8N1D0 253 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 OR10V1Q8NGI7 309 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 ELOVL1Q9BW60 279 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 SMOC1Q9H4F8 434 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 DOCK9Q9BZ29 2069 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 TRAV34A0A0B4J273 112 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 TRAF3IP2O43734 574 aaPredicted RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 MYF5P13349 255 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 PMCHP20382 165 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 LTC4SQ16873 150 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 ABLIM2Q6H8Q1 611 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 MYPOPQ86VE0 399 aaPredicted RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 RPS19BP1Q86WX3 136 aaKnown RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 OR1K1Q8NGR3 316 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 ZNF319Q9P2F9 582 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 B4GALT7Q9UBV7 327 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 A0A096LPE4 126 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 CTXND1A0A1B0GTU2 59 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 A0A1W2PPZ6 126 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 FCN1O00602 326 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 PSG2P11465 335 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 F2RP25116 425 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 RBM11P57052 281 aaKnown RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 ZNF816Q0VGE8 651 aaPredicted RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 PLPPR5Q32ZL2 321 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 ZNF468Q5VIY5 522 aaPredicted RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 VN1R17PQ8TDU5 208 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 ZNF385AQ96PM9 386 aaKnown RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 HS3ST3B1Q9Y662 390 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 CEACAM18A8MTB9 384 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 KIAA1324LA8MWY0 1029 aaPredicted RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 RPL36A-HNRNPH2H7BZ11 118 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 ATXN7O15265 892 aaPredicted RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 CFIP05156 583 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 MGST1P10620 155 aaKnown RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 ZNF17P17021 662 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 EIF3IQ13347 325 aaKnown RBP6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 VAMP3Q15836 100 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 ZNF573Q86YE8 665 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 GCNT2Q8N0V5 402 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 OR5AU1Q8NGC0 362 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 OR10S1Q8NGN2 331 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 OR4A16Q8NH70 328 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 TMEM147Q9BVK8 224 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 CDH20Q9HBT6 801 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 SDF2L1Q9HCN8 221 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 PCNTO95613 3336 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 DENND4AQ7Z401 1863 aa6.64□□□□□ -1.35
COL6A4P1-202ENST00000487147 RALGAPA1Q6GYQ0 2036 aa6.63□□□□□ -1.35
COL6A4P1-202ENST00000487147 PIAS2O75928 621 aa6.63□□□□□ -1.35
COL6A4P1-202ENST00000487147 SCTP09683 121 aa6.63□□□□□ -1.35
COL6A4P1-202ENST00000487147 EDDM3BP56851 147 aa6.63□□□□□ -1.35
COL6A4P1-202ENST00000487147 HERPUD1Q15011 391 aa6.63□□□□□ -1.35
COL6A4P1-202ENST00000487147 RSPO4Q2I0M5 234 aaPredicted RBP6.63□□□□□ -1.35
COL6A4P1-202ENST00000487147 CISD2Q8N5K1 135 aaKnown RBP6.63□□□□□ -1.35
COL6A4P1-202ENST00000487147 SGMS2Q8NHU3 365 aa6.63□□□□□ -1.35
COL6A4P1-202ENST00000487147 NANOS1Q8WY41 292 aaKnown RBP6.63□□□□□ -1.35
COL6A4P1-202ENST00000487147 KCNIP2Q9NS61 270 aa6.63□□□□□ -1.35
COL6A4P1-202ENST00000487147 RFNGQ9Y644 331 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms