RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 TMEM222Q9H0R3 208 aa9.73□□□□□ -0.85
PRKCB-207ENST00000486868 ZNF665Q9H7R5 613 aa9.73□□□□□ -0.85
PRKCB-207ENST00000486868 METTL8Q9H825 291 aaKnown RBP9.73□□□□□ -0.85
PRKCB-207ENST00000486868 FAM212BQ9NTI7 297 aaPredicted RBP9.73□□□□□ -0.85
PRKCB-207ENST00000486868 OR6C3Q9NZP0 311 aa9.73□□□□□ -0.85
PRKCB-207ENST00000486868 RP1L1Q8IWN7 2480 aaPredicted RBP9.73□□□□□ -0.85
PRKCB-207ENST00000486868 CADP27708 2225 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 TRAV38-1A0A0B4J264 116 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 IGKV1D-13A0A0B4J2D9 117 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 ODAMA1E959 279 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 C12orf77C9JDV5 145 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 H0Y980 276 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 L7N2F9 121 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 SPINT2O43291 252 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 MPC2O95563 127 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 OR5AC1P0C628 307 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 IGKV1-13P0DP09 117 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 UCP1P25874 307 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 LOXP28300 417 aaPredicted RBP9.72□□□□□ -0.85
PRKCB-207ENST00000486868 IL2RGP31785 369 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 S100A11P31949 105 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 GABRA2P47869 451 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 CEBPDP49716 269 aaPredicted RBP9.72□□□□□ -0.85
PRKCB-207ENST00000486868 P2RX3P56373 397 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 AESQ08117 197 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 SWI5Q1ZZU3 235 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 MST1LQ2TV78 715 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 SPRNQ5BIV9 151 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 ZNF818PQ6ZRF7 136 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 ZNF546Q86UE3 836 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 TCTEX1D1Q8N7M0 179 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 LINC01560Q8TB33 94 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 THAP6Q8TBB0 222 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 SECTM1Q8WVN6 248 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 CORO2AQ92828 525 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 WDR89Q96FK6 387 aaPredicted RBP9.72□□□□□ -0.85
PRKCB-207ENST00000486868 HEXA-AS1Q9H8Q6 139 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 LINC00574Q9H8X3 128 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 TNFSF18Q9UNG2 199 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 MAB21L2Q9Y586 359 aa9.72□□□□□ -0.85
PRKCB-207ENST00000486868 NKX2-6A6NCS4 301 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 RNF212BA8MTL3 300 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 DEFB108AA8MXU0 73 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 FAM25EA8MYX2 175 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 C3orf80F5H4A9 247 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 C15orf65H3BRN8 121 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 F2RL2O00254 374 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 CCSO14618 274 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 SIGLEC5O15389 551 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 HSPA12AO43301 675 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 NDUFA2O43678 99 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 PGLYRP1O75594 196 aaPredicted RBP9.71□□□□□ -0.86
PRKCB-207ENST00000486868 CDS2O95674 445 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 HBZP02008 142 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 CGB3P0DN86 165 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 CGB7P0DN87 165 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 CXCL2P19875 107 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 F2RP25116 425 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 CEACAM6P40199 344 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 OPCMLQ14982 345 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 ZNF672Q499Z4 452 aaPredicted RBP9.71□□□□□ -0.86
PRKCB-207ENST00000486868 PHLDA2Q53GA4 152 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 GGNBP1Q5YKI7 109 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 PRSS54Q6PEW0 395 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 ACOT7LQ6ZUV0 252 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 TBC1D26Q86UD7 250 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 KCNRGQ8N5I3 272 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 C14orf79Q96F83 325 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 ABHD14BQ96IU4 210 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 SEC22AQ96IW7 307 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 SPIN2AQ99865 258 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 SPIN2BQ9BPZ2 258 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 MFFQ9GZY8 342 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 SAP30LQ9HAJ7 183 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 CCL28Q9NRJ3 127 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 RDH8Q9NYR8 311 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 CISD1Q9NZ45 108 aaKnown RBP9.71□□□□□ -0.86
PRKCB-207ENST00000486868 METRNQ9UJH8 293 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 JPT1Q9UK76 154 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 GAB2Q9UQC2 676 aa9.71□□□□□ -0.86
PRKCB-207ENST00000486868 PIEZO2Q9H5I5 2752 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 FXYD6-FXYD2A0A087WZ82 144 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 C13orf42A0A1B0GVH6 325 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 CLEC18AA5D8T8 446 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 TMEM178BH3BS89 294 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 TNFRSF13BO14836 293 aaPredicted RBP9.7□□□□□ -0.86
PRKCB-207ENST00000486868 ATXN7O15265 892 aaPredicted RBP9.7□□□□□ -0.86
PRKCB-207ENST00000486868 PHF1O43189 567 aaPredicted RBP9.7□□□□□ -0.86
PRKCB-207ENST00000486868 YPEL1O60688 119 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 ADAP1O75689 374 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 ZNF205O95201 554 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 GOSR1O95249 250 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 CLDN14O95500 239 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 SLC25A6P12236 298 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 GLIPR1P48060 266 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 PPOXP50336 477 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 SNRPD2P62316 118 aaKnown RBP9.7□□□□□ -0.86
PRKCB-207ENST00000486868 TMUB2Q71RG4 321 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 CLEC18CQ8NCF0 446 aa9.7□□□□□ -0.86
PRKCB-207ENST00000486868 IL1F10Q8WWZ1 152 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms