RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 CALML5Q9NZT1 146 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 TAAR3PQ9P1P4 343 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 MARCOQ9UEW3 520 aaPredicted RBP5.65□□□□□ -1.5
HDAC3-209ENST00000486618 ZNF221Q9UK13 617 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 WIPI2Q9Y4P8 454 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 PEX16Q9Y5Y5 336 aa5.65□□□□□ -1.5
HDAC3-209ENST00000486618 DOCK11Q5JSL3 2073 aa5.65□□□□□ -1.51
HDAC3-209ENST00000486618 PRSS51A0A1B0GVH4 220 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 CCDC182A6NF36 153 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 C5orf58C9J3I9 102 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 TIMM23O14925 209 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 SSNA1O43805 119 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 OR2T1O43869 369 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 CHST1O43916 411 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 UBL3O95164 117 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 CST2P09228 141 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 DDOSTP39656 456 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 AKR1C3P42330 323 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 KLF3P57682 345 aaPredicted RBP5.64□□□□□ -1.51
HDAC3-209ENST00000486618 LOXL3P58215 753 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 TAS2R41P59536 307 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 RPL32P62910 135 aaKnown RBP5.64□□□□□ -1.51
HDAC3-209ENST00000486618 CCL8P80075 99 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 PIGFQ07326 219 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 FUT5Q11128 374 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 ATP6V1FQ16864 119 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 CEACAM21Q3KPI0 293 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 MRPL2Q5T653 305 aaKnown RBP5.64□□□□□ -1.51
HDAC3-209ENST00000486618 ZCCHC23Q6ZST2 131 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 MEPCEQ7L2J0 689 aaKnown RBP5.64□□□□□ -1.51
HDAC3-209ENST00000486618 CENPSQ8N2Z9 138 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 ZSCAN4Q8NAM6 433 aaPredicted RBP5.64□□□□□ -1.51
HDAC3-209ENST00000486618 OR5H6Q8NGV6 325 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 SYNPRQ8TBG9 265 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 ASB17Q8WXJ9 295 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 NEURL3Q96EH8 262 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 MIXL1Q9H2W2 232 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 TMPRSS5Q9H3S3 457 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 ANKRD19PQ9H560 264 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 SPANXB1Q9NS25 103 aaPredicted RBP5.64□□□□□ -1.51
HDAC3-209ENST00000486618 GLTPQ9NZD2 209 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 FZR1Q9UM11 496 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 POLDIP2Q9Y2S7 368 aa5.64□□□□□ -1.51
HDAC3-209ENST00000486618 KIR2DL5BA0A0G2JN68 375 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 KIR2DL5BA0A0G2JPC4 375 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 LOC102725191A0A1B0GVB3 256 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 ISPDA4D126 451 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 SEC14L6B5MCN3 397 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 ANKRD65E5RJM6 399 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 PPP5D1E7EU14 171 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 HMGN4O00479 90 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 PLPP3O14495 311 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 RGS5O15539 181 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 TRAF3IP2O43734 574 aaPredicted RBP5.63□□□□□ -1.51
HDAC3-209ENST00000486618 NPIPB7O75200 414 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 SPAG7O75391 227 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 GAPDHP04406 335 aaKnown RBP5.63□□□□□ -1.51
HDAC3-209ENST00000486618 CRYBA1P05813 215 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 BCHEP06276 602 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 HTR1AP08908 422 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 TSPAN19P0C672 248 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 ACSM4P0C7M7 580 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 GKN3PP0CG01 181 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 ETFAP13804 333 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF25P17030 456 aaPredicted RBP5.63□□□□□ -1.51
HDAC3-209ENST00000486618 MDKP21741 143 aaPredicted RBP5.63□□□□□ -1.51
HDAC3-209ENST00000486618 MPZP25189 248 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 EFNB2P52799 333 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 TMEM50BP56557 158 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 NCALDP61601 193 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 EMX2Q04743 252 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 CDNFQ49AH0 187 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 LIN52Q52LA3 116 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 LY6G6FQ5SQ64 297 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 LEG1Q6P5S2 330 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF627Q7L945 461 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 TCF24Q7RTU0 167 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 LRRC28Q86X40 367 aaPredicted RBP5.63□□□□□ -1.51
HDAC3-209ENST00000486618 RDH10Q8IZV5 341 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 KIR2DL5AQ8N109 375 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 AQP11Q8NBQ7 271 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 OR9Q1Q8NGQ5 310 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 KIR2DL5BQ8NHK3 375 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF519Q8TB69 540 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 RGP1Q92546 391 aaPredicted RBP5.63□□□□□ -1.51
HDAC3-209ENST00000486618 FLYWCH2Q96CP2 140 aaKnown RBP5.63□□□□□ -1.51
HDAC3-209ENST00000486618 MAGEB18Q96M61 343 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 C1orf147Q96MC9 270 aaPredicted RBP5.63□□□□□ -1.51
HDAC3-209ENST00000486618 TSSK2Q96PF2 358 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 OR2M2Q96R28 347 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 SAP30LQ9HAJ7 183 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 MRPS18AQ9NVS2 196 aaKnown RBP5.63□□□□□ -1.51
HDAC3-209ENST00000486618 GHRLQ9UBU3 117 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 PURGQ9UJV8 347 aaKnown RBP5.63□□□□□ -1.51
HDAC3-209ENST00000486618 TIMM10BQ9Y5J6 103 aa5.63□□□□□ -1.51
HDAC3-209ENST00000486618 IGLV3-9A0A075B6K5 115 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 CDHR4A6H8M9 788 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 ZNF726A6NNF4 738 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 H3BTX0 84 aa5.62□□□□□ -1.51
HDAC3-209ENST00000486618 SIRPB1O00241 398 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms