RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 GGNBP1Q5YKI7 109 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 DHRS11Q6UWP2 260 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 KRTAP1-3Q8IUG1 177 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 WDFY1Q8IWB7 410 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 LINC00518Q8N0U6 118 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 LRRC75A-AS1Q8N1F1 130 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 OSR2Q8N2R0 312 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 OR5D18Q8NGL1 313 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 NPRL2Q8WTW4 380 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 C18orf12Q96KH6 178 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 LYZL4Q96KX0 146 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 TCEAL7Q9BRU2 100 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 SLC25A31Q9H0C2 315 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 SAV1Q9H4B6 383 aaPredicted RBP7.69□□□□□ -1.18
COL12A1-208ENST00000486533 PARPBPQ9NWS1 579 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 ZNF319Q9P2F9 582 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 FBXL17Q9UF56 701 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 RAI1Q7Z5J4 1906 aaPredicted RBP7.69□□□□□ -1.18
COL12A1-208ENST00000486533 USF3Q68DE3 2245 aa7.69□□□□□ -1.18
COL12A1-208ENST00000486533 ZNF816-ZNF321PA0A0X1KG74 233 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 A0A1W2PP11 408 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 LRP5LA4QPB2 252 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 C1orf196B1AJZ1 125 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 H7C1Q1 480 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 HSPA12AO43301 675 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 CYTIPO60759 359 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 PDCD6O75340 191 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 CDS2O95674 445 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 NRASP01111 189 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 LCATP04180 440 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 CD5P06127 495 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 FCGR3AP08637 254 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 CTXN2P0C2S0 81 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 MMP9P14780 707 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 CAMLGP49069 296 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 PIGPP57054 158 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 RAB1AP62820 205 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 PDZK1IP1Q13113 114 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 ZNF266Q14584 549 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 OXLD1Q5BKU9 147 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 RPL7L1Q6DKI1 246 aaKnown RBP7.68□□□□□ -1.18
COL12A1-208ENST00000486533 BTNL8Q6UX41 500 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 Q6ZRG5 221 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.68□□□□□ -1.18
COL12A1-208ENST00000486533 LRRC18Q8N456 261 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 OR4A4PQ8NGN8 299 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 KIRREL1Q96J84 757 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 SMR3AQ99954 134 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 OPA3Q9H6K4 179 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 GPR173Q9NS66 373 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 TMEM38BQ9NVV0 291 aa7.68□□□□□ -1.18
COL12A1-208ENST00000486533 LSM5Q9Y4Y9 91 aaKnown RBP7.68□□□□□ -1.18
COL12A1-208ENST00000486533 FAM230AA0A1W2PPH8 454 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 MSGN1A6NI15 193 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 ZNF814B7Z6K7 855 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 UMAD1C9J7I0 102 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 HS3ST1O14792 307 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 LYZL6O75951 148 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 SCGB1D2O95969 90 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 PLAUP00749 431 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 S100A8P05109 93 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 S100A9P06702 114 aaKnown RBP7.67□□□□□ -1.18
COL12A1-208ENST00000486533 MUC1P15941 1255 aaPredicted RBP7.67□□□□□ -1.18
COL12A1-208ENST00000486533 PI3P19957 117 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 CHATP28329 748 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 HTR5AP47898 357 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 TMEM33P57088 247 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 P2RY6Q15077 328 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 RHEBQ15382 184 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 MST1LQ2TV78 715 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 RNF212Q495C1 297 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 TMEM42Q69YG0 159 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 FBXW12Q6X9E4 464 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 Q6ZS49 121 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 C1orf229Q6ZS94 237 aaPredicted RBP7.67□□□□□ -1.18
COL12A1-208ENST00000486533 Q6ZT83 130 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 Q71RC1 249 aaPredicted RBP7.67□□□□□ -1.18
COL12A1-208ENST00000486533 BHLHA15Q7RTS1 189 aaPredicted RBP7.67□□□□□ -1.18
COL12A1-208ENST00000486533 AAED1Q7RTV5 226 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 C6orf201Q7Z4U5 140 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 LINC00596Q86U02 117 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 SAXO1Q8IYX7 474 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 OR51F2Q8NH61 342 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 LYPD6BQ8NI32 183 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 TMEM171Q8WVE6 324 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 RTN4IP1Q8WWV3 396 aaPredicted RBP7.67□□□□□ -1.18
COL12A1-208ENST00000486533 SGK3Q96BR1 496 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 MOB3AQ96BX8 217 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 Q96MF0 132 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 GINS3Q9BRX5 216 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 ARV1Q9H2C2 271 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 RIMS4Q9H426 269 aaPredicted RBP7.67□□□□□ -1.18
COL12A1-208ENST00000486533 ESRP2Q9H6T0 727 aaKnown RBP7.67□□□□□ -1.18
COL12A1-208ENST00000486533 TUBA4BQ9H853 241 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 NGBQ9NPG2 151 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 PRSS50Q9UI38 385 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 AK3Q9UIJ7 227 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 STARD10Q9Y365 291 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 CADP27708 2225 aa7.67□□□□□ -1.18
COL12A1-208ENST00000486533 KIR2DS1A0A191URI9 304 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms