RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 OR2Z1Q8NG97 314 aa17.15■□□□□ 0.34
HPS3-206ENST00000486530 OR52M1Q8NGK5 317 aa17.15■□□□□ 0.34
HPS3-206ENST00000486530 OR4D5Q8NGN0 318 aa17.15■□□□□ 0.34
HPS3-206ENST00000486530 LRRC20Q8TCA0 184 aa17.15■□□□□ 0.34
HPS3-206ENST00000486530 IL22RA2Q969J5 263 aa17.15■□□□□ 0.34
HPS3-206ENST00000486530 TRAV39A0A0B4J263 110 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 IFNL4K9M1U5 179 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 ST8SIA3O43173 380 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 WNT2P09544 360 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 KLF3P57682 345 aaPredicted RBP17.14■□□□□ 0.33
HPS3-206ENST00000486530 RPS23P62266 143 aaKnown RBP17.14■□□□□ 0.33
HPS3-206ENST00000486530 MRGPRGQ86SM5 289 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 OR5D13Q8NGL4 314 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 SNRNP40Q96DI7 357 aaKnown RBP17.14■□□□□ 0.33
HPS3-206ENST00000486530 TAF9BQ9HBM6 251 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 KCNIP1Q9NZI2 227 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 DUSP13Q9UII6 198 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 HSPA12AO43301 675 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 PTBP3O95758 552 aaKnown RBP17.14■□□□□ 0.33
HPS3-206ENST00000486530 F2RP25116 425 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 TESK1Q15569 626 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 PRR18Q8N4B5 295 aa17.14■□□□□ 0.33
HPS3-206ENST00000486530 EIF4E3Q8N5X7 224 aaKnown RBP17.14■□□□□ 0.33
HPS3-206ENST00000486530 SHOXO15266 292 aa17.13■□□□□ 0.33
HPS3-206ENST00000486530 FAM27E3Q08E93 113 aa17.13■□□□□ 0.33
HPS3-206ENST00000486530 UNQ6494/PRO21346Q6UXR6 183 aa17.13■□□□□ 0.33
HPS3-206ENST00000486530 GFRALQ6UXV0 394 aa17.13■□□□□ 0.33
HPS3-206ENST00000486530 LRP11Q86VZ4 500 aa17.13■□□□□ 0.33
HPS3-206ENST00000486530 GALNT11Q8NCW6 608 aa17.13■□□□□ 0.33
HPS3-206ENST00000486530 OR10Z1Q8NGY1 313 aa17.13■□□□□ 0.33
HPS3-206ENST00000486530 LILRB1Q8NHL6 650 aaPredicted RBP17.13■□□□□ 0.33
HPS3-206ENST00000486530 LRRC29Q8WV35 223 aa17.13■□□□□ 0.33
HPS3-206ENST00000486530 AKR1E2Q96JD6 320 aa17.13■□□□□ 0.33
HPS3-206ENST00000486530 DNTTIP1Q9H147 329 aa17.13■□□□□ 0.33
HPS3-206ENST00000486530 BARX1Q9HBU1 254 aaPredicted RBP17.13■□□□□ 0.33
HPS3-206ENST00000486530 POMT1Q9Y6A1 747 aa17.13■□□□□ 0.33
HPS3-206ENST00000486530 DSPP15924 2871 aaKnown RBP17.13■□□□□ 0.33
HPS3-206ENST00000486530 ARID1AO14497 2285 aa17.13■□□□□ 0.33
HPS3-206ENST00000486530 A0A0G2JNJ9 132 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 NKX2-6A6NCS4 301 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 FGF2P09038 288 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 PRR30Q53SZ7 412 aaPredicted RBP17.12■□□□□ 0.33
HPS3-206ENST00000486530 GPHA2Q96T91 129 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 Q9UFV3 132 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 ZNF835Q9Y2P0 537 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 IGLV3-9A0A075B6K5 115 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 ZSCAN5BA6NJL1 495 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 A8MXK9 166 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 TNFSF12O43508 249 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 HEXAP06865 529 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 ZP3P21754 424 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 VDAC1P21796 283 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 TMEM171Q8WVE6 324 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 ABHD14BQ96IU4 210 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 ASF1BQ9NVP2 202 aa17.12■□□□□ 0.33
HPS3-206ENST00000486530 CLEC18AA5D8T8 446 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 OOEPA6NGQ2 149 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 ATP6V1G2-DDX39BF2Z307 99 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 FGF16O43320 207 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 GAPDHP04406 335 aaKnown RBP17.11■□□□□ 0.33
HPS3-206ENST00000486530 CFHR2P36980 270 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 OR3A1P47881 315 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 P2RY1P47900 373 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 GPR157Q5UAW9 335 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 FAM90A1Q86YD7 464 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 CLEC18CQ8NCF0 446 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 RNF141Q8WVD5 230 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 ZCCHC14Q8WYQ9 949 aaKnown RBP17.11■□□□□ 0.33
HPS3-206ENST00000486530 OR2S2Q9NQN1 319 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 ELOVL5Q9NYP7 299 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 FBXL17Q9UF56 701 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 ZGRF1Q86YA3 2104 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 NCOR2Q9Y618 2525 aa17.11■□□□□ 0.33
HPS3-206ENST00000486530 SRRM5B3KS81 715 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 GPR137BO60478 399 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 COL10A1Q03692 680 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 GNMTQ14749 295 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 NMSQ5H8A3 153 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 EIF5AL1Q6IS14 154 aaKnown RBP17.1■□□□□ 0.33
HPS3-206ENST00000486530 TMED6Q8WW62 240 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 COQ2Q96H96 371 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 RCL1Q9Y2P8 373 aaKnown RBP17.1■□□□□ 0.33
HPS3-206ENST00000486530 RBM7Q9Y580 266 aaKnown RBP17.1■□□□□ 0.33
HPS3-206ENST00000486530 MED19A0JLT2 244 aaPredicted RBP17.1■□□□□ 0.33
HPS3-206ENST00000486530 CCKARP32238 428 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 CEACAM6P40199 344 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 TMEM33P57088 247 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 HOXA4Q00056 320 aaPredicted RBP17.1■□□□□ 0.33
HPS3-206ENST00000486530 PAX5Q02548 391 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 RPL7L1Q6DKI1 246 aaKnown RBP17.1■□□□□ 0.33
HPS3-206ENST00000486530 VHLLQ6RSH7 139 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 GALMQ96C23 342 aa17.1■□□□□ 0.33
HPS3-206ENST00000486530 KIAA2026Q5HYC2 2103 aa17.09■□□□□ 0.33
HPS3-206ENST00000486530 C12orf77C9JDV5 145 aa17.09■□□□□ 0.33
HPS3-206ENST00000486530 ADAM20O43506 726 aa17.09■□□□□ 0.33
HPS3-206ENST00000486530 JTBO76095 146 aa17.09■□□□□ 0.33
HPS3-206ENST00000486530 IGLV2-14P01704 120 aa17.09■□□□□ 0.33
HPS3-206ENST00000486530 NKX2-1P43699 371 aaPredicted RBP17.09■□□□□ 0.33
HPS3-206ENST00000486530 GABRA2P47869 451 aa17.09■□□□□ 0.33
HPS3-206ENST00000486530 AESQ08117 197 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms