RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 HAAOP46952 286 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 GPM6AP51674 278 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 SNU13P55769 128 aaKnown RBP7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 RAP2BP61225 183 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 PAX2Q02962 417 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 PAX8Q06710 450 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 SRSF4Q08170 494 aaKnown RBP7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 TAF9Q16594 264 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 LPCAT3Q6P1A2 487 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 Q6ZS49 121 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 SLC25A42Q86VD7 318 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 BHLHE23Q8NDY6 225 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 BEST4Q8NFU0 473 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 OR4S1Q8NGB4 309 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 OR11H7Q8NGC8 314 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 OR5AP2Q8NGF4 316 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 ZNF431Q8TF32 576 aaPredicted RBP7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 MEGF10Q96KG7 1140 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 CMSS1Q9BQ75 279 aaKnown RBP7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 ZNF436Q9C0F3 470 aaPredicted RBP7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 OR51I2Q9H344 312 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 IFT22Q9H7X7 185 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 ELF5Q9UKW6 265 aaPredicted RBP7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 NUP50Q9UKX7 468 aa7.78□□□□□ -1.16
TMEM39A-208ENST00000486159 A0A1B0GWJ7 208 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 FAM172BPA6NC97 362 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 RGS11O94810 467 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 OR2A4O95047 310 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 SFTPBP07988 381 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 HKR1P10072 659 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 ANXA7P20073 488 aaKnown RBP7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 OMGP23515 440 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 TSPAN5P62079 268 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 BAMBIQ13145 260 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 KCNJ8Q15842 424 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 MICBQ29980 383 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 SCGB2B2Q4G0G5 96 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 TMEM155Q4W5P6 130 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 C4orf46Q504U0 113 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 ATPAF1Q5TC12 328 aaPredicted RBP7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 SIGIRRQ6IA17 410 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 C11orf88Q6PI97 169 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 OVCH2Q7RTZ1 564 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 C6orf201Q7Z4U5 140 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 MOGAT3Q86VF5 341 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 CALHM1Q8IU99 346 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 GVQW1Q8N7I0 195 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 TMEM185AQ8NFB2 350 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 OR8G5Q8NG78 346 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 OR13C8Q8NGS7 320 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 FYTTD1Q96QD9 318 aaKnown RBP7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 OR2A7Q96R45 310 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 JMJD8Q96S16 334 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 DIRC2Q96SL1 478 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 TMEM246Q9BRR3 403 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 ST6GALNAC5Q9BVH7 336 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 PPA2Q9H2U2 334 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 C12orf4Q9NQ89 552 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 TNFRSF19Q9NS68 423 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 TMEM100Q9NV29 134 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 RCC2Q9P258 522 aaKnown RBP7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 IL19Q9UHD0 177 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 ZNF222Q9UK12 451 aa7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 PAIP2BQ9ULR5 123 aaKnown RBP7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 POLR3KQ9Y2Y1 108 aaPredicted RBP7.77□□□□□ -1.17
TMEM39A-208ENST00000486159 PPIAL4EA0A075B759 164 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 A0A0B4J2A0 478 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 PPIAL4CA0A0B4J2A2 164 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 A8MXK9 166 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 PPIAL4DF5H284 164 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 GEMIN2O14893 280 aaKnown RBP7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 NOS1APO75052 506 aaPredicted RBP7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 FCN3O75636 299 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 PLATP00750 562 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 PMP2P02689 132 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 OR4E1P0C645 316 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 PPIAL4FP0DN26 164 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 VSIG10L2P0DP72 767 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 TNFRSF1AP19438 455 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 C4BPBP20851 252 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 CA6P23280 308 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 GATA3P23771 443 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 PRTN3P24158 256 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 FPR2P25090 351 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 ARPC4P59998 168 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 RBM39Q14498 530 aaKnown RBP7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 SLC9A3R2Q15599 337 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 DMRTC1Q5HYR2 192 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 NKAPLQ5M9Q1 402 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 PRAMEF6Q5VXH4 476 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 RUSC1-AS1Q66K80 236 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 OR52W1Q6IF63 320 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 FIP1L1Q6UN15 594 aaKnown RBP7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 BRD3OSQ6XYD6 125 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 LHFPL1Q86WI0 220 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 C12orf45Q8N5I9 185 aaPredicted RBP7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 ZFAND1Q8TCF1 268 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 DMRTB1Q96MA1 342 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 SEC22CQ9BRL7 303 aa7.76□□□□□ -1.17
TMEM39A-208ENST00000486159 FAAP24Q9BTP7 215 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms