RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	ARG1	P05089	322 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	PRRX1	P54821	245 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	OLFML2A	Q68BL7	652 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	HCP5	Q6MZN7	132 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	C9orf139	Q6ZV77	190 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	SLC25A38	Q96DW6	304 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	KIRREL1	Q96J84	757 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	ABCG5	Q9H222	651 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	TAF9B	Q9HBM6	251 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	C12orf4	Q9NQ89	552 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	MGAT4A	Q9UM21	535 aa		11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	SOX21	Q9Y651	276 aa	Predicted RBP	11.28	□□□□□ -0.6
SCAP-211	ENST00000485967	IGHV2-26	A0A0B4J1V2	119 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	SMIM31	A0A1B0GVY4	71 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	FAM172BP	A6NC97	362 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	C12orf77	C9JDV5	145 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	NPIPB11	E5RHQ5	1161 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	C15orf65	H3BRN8	121 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	SDCBP	O00560	298 aa	Predicted RBP	11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	MFNG	O00587	321 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	NAPSA	O96009	420 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	HBZ	P02008	142 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	GSTP1	P09211	210 aa	Known RBP	11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	GDNF	P39905	211 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	MNDA	P41218	407 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	MIDN	Q504T8	468 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	BAIAP2L2	Q6UXY1	529 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	MOB1B	Q7L9L4	216 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	ZNF554	Q86TJ5	538 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	SIGLECL1	Q8N7X8	197 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	OR11H6	Q8NGC7	330 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	OR1L1	Q8NH94	360 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	LINC00574	Q9H8X3	128 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	MBNL3	Q9NUK0	354 aa	Known RBP	11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	RSL24D1	Q9UHA3	163 aa	Known RBP	11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	KCNK7	Q9Y2U2	307 aa		11.27	□□□□□ -0.61
SCAP-211	ENST00000485967	TRBV6-6	A0A0A6YYG2	114 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967		A0A0U1RQK1	487 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	POM121C	A8CG34	1229 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	FAM25A	B3EWG3	89 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	FAM25C	B3EWG5	89 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	FAM25G	B3EWG6	89 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	TCF21	O43680	179 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	IGHV3-7	P01780	117 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	SAA4	P35542	130 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	GNG2	P59768	71 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	PITPNA	Q00169	270 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	DEFB112	Q30KQ8	113 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	HACD4	Q5VWC8	232 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	IZUMO1	Q8IYV9	350 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	DTX3	Q8N9I9	347 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	OR52M1	Q8NGK5	317 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	ZNF596	Q8TC21	504 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	GALM	Q96C23	342 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	CMTM3	Q96MX0	182 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	JMJD8	Q96S16	334 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967		Q9N2K0	584 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	NDUFA13	Q9P0J0	144 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	GNG12	Q9UBI6	72 aa		11.26	□□□□□ -0.61
SCAP-211	ENST00000485967	IGHV3-43	A0A0B4J1X8	118 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	TMEM235	A6NFC5	223 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	RGS5	O15539	181 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	XRCC3	O43542	346 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	HPGDS	O60760	199 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	APOA1	P02647	267 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	FBP1	P09467	338 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	IGHV3-43D	P0DP04	118 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	GNG10	P50151	68 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	PNLIPRP3	Q17RR3	467 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	TMEM30B	Q3MIR4	351 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	ZNF260	Q3ZCT1	412 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	TMEM69	Q5SWH9	247 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	ZNF880	Q6PDB4	577 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	OR9G1	Q8NH87	305 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	DYNC2LI1	Q8TCX1	351 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	IL1F10	Q8WWZ1	152 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	LEAP2	Q969E1	77 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	C19orf24	Q9BVV8	132 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	ZNF286A	Q9HBT8	521 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	OR2S2	Q9NQN1	319 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	GFOD1	Q9NXC2	390 aa		11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	CCDC59	Q9P031	241 aa	Known RBP	11.25	□□□□□ -0.61
SCAP-211	ENST00000485967	TBL2	Q9Y4P3	447 aa	Known RBP	11.25	□□□□□ -0.61
SCAP-211	ENST00000485967		A0A087X0M5	115 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967		A0A0A6YYJ9	748 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	MDFIC2	A0A1B0GVS7	189 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967		A0A1B0GX30	115 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	TRDC	B7Z8K6	153 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	ZNF701	M0R085	212 aa	Predicted RBP	11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	F2RL2	O00254	374 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	EIF4E	P06730	217 aa	Known RBP	11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	FCGR3A	P08637	254 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	HTR1D	P28221	377 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	CD34	P28906	385 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	SRSF2	Q01130	221 aa	Known RBP	11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	BAMBI	Q13145	260 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	HMGN3	Q15651	99 aa		11.24	□□□□□ -0.61
SCAP-211	ENST00000485967	ZNF626	Q68DY1	528 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms