RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 RASL10AQ92737 203 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 APOBEC3DQ96AK3 386 aaPredicted RBP3.72□□□□□ -1.81
RTN4-213ENST00000485749 C4orf45Q96LM5 186 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 PITX2Q99697 317 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 FAM173AQ9BQD7 235 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 PITPNM3Q9BZ71 974 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 POPDC3Q9HBV1 291 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 GPR84Q9NQS5 396 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 UBQLN4Q9NRR5 601 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 RBM22Q9NW64 420 aaKnown RBP eCLIP3.72□□□□□ -1.81
RTN4-213ENST00000485749 TAS2R16Q9NYV7 291 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 ANXA10Q9UJ72 324 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 TBX21Q9UL17 535 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 LAMTOR2Q9Y2Q5 125 aa3.72□□□□□ -1.81
RTN4-213ENST00000485749 COL1A1P02452 1464 aaPredicted RBP3.72□□□□□ -1.81
RTN4-213ENST00000485749 RGPD8O14715 1765 aaPredicted RBP3.71□□□□□ -1.81
RTN4-213ENST00000485749 DCCP43146 1447 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 ARAP2Q8WZ64 1704 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 ZNF726A6NNF4 738 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 FOXI3A8MTJ6 420 aaPredicted RBP3.71□□□□□ -1.82
RTN4-213ENST00000485749 A8MWP6 167 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 C11orf98E9PRG8 122 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 H7C417 338 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 J3QR89 54 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 K7EQS6 105 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 AIPO00170 330 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 TNFRSF13BO14836 293 aaPredicted RBP3.71□□□□□ -1.82
RTN4-213ENST00000485749 RBFOX2O43251 390 aaKnown RBP eCLIP3.71□□□□□ -1.82
RTN4-213ENST00000485749 ICOSLGO75144 302 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 TOMM40O96008 361 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 MOSP00540 346 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 OPN1SWP03999 348 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 SHBGP04278 402 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 PFN1P07737 140 aaKnown RBP3.71□□□□□ -1.82
RTN4-213ENST00000485749 FAM157CP0CG43 387 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 TRAPPC2P0DI81 140 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 TRAPPC2BP0DI82 140 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 SMIM17P0DL12 118 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 FOLR2P14207 255 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 GABRG2P18507 467 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 SPRP35270 261 aaPredicted RBP3.71□□□□□ -1.82
RTN4-213ENST00000485749 BTG1P62324 171 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 CDK6Q00534 326 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 ZNF155Q12901 538 aaPredicted RBP3.71□□□□□ -1.82
RTN4-213ENST00000485749 GUCA2BQ16661 112 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 DUSP5Q16690 384 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 TIGITQ495A1 244 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 OR2T5Q6IEZ7 315 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 GTF2H5Q6ZYL4 71 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 PIP4P1Q86T03 277 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 SNX29P2Q8IUI4 249 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 OR8I2Q8N0Y5 310 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 NEXN-AS1Q8NBZ9 246 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 OR2T33Q8NG76 320 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 OR52L1Q8NGH7 329 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 OR13C8Q8NGS7 320 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 OR2T29Q8NH02 315 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 OR5W2Q8NH69 310 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 OR5K1Q8NHB7 308 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 PRSS3P2Q8NHM4 247 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 NT5CQ8TCD5 201 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 PIFOQ8TCI5 191 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 RBPMSQ93062 196 aaKnown RBP3.71□□□□□ -1.82
RTN4-213ENST00000485749 HIST1H2BAQ96A08 127 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 EMC6Q9BV81 110 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 SLC29A3Q9BZD2 475 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 OR51I2Q9H344 312 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 CDC42EP4Q9H3Q1 356 aaKnown RBP3.71□□□□□ -1.82
RTN4-213ENST00000485749 ISG20L2Q9H9L3 353 aaKnown RBP3.71□□□□□ -1.82
RTN4-213ENST00000485749 DMAC2Q9NW81 257 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 RBFOX1Q9NWB1 397 aaKnown RBP3.71□□□□□ -1.82
RTN4-213ENST00000485749 KCNIP1Q9NZI2 227 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 RPS6KB2Q9UBS0 482 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 NAT8BQ9UHF3 227 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 PKIGQ9Y2B9 76 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 UGT2A1Q9Y4X1 527 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 PCYT1BQ9Y5K3 369 aaPredicted RBP3.71□□□□□ -1.82
RTN4-213ENST00000485749 CASZ1Q86V15 1759 aa3.71□□□□□ -1.82
RTN4-213ENST00000485749 PAPPAQ13219 1627 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 KAT6AQ92794 2004 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 TRAV39A0A0B4J263 110 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 TRAV38-1A0A0B4J264 116 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 IGLV5-39A0A0G2JS06 123 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 TRBV5-5A0A0J9YX44 114 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 A0A0J9YY10 115 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 A0A1B0GX78 115 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.7□□□□□ -1.82
RTN4-213ENST00000485749 HCRTR1O43613 425 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 IFNA7P01567 189 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 SLC35G6P0C7Q6 338 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 FGF3P11487 239 aaPredicted RBP3.7□□□□□ -1.82
RTN4-213ENST00000485749 MYL9P24844 172 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 GNG4P50150 75 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 FABP6P51161 128 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 UBE2E1P51965 193 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 PROK1P58294 105 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 HIST1H1AQ02539 215 aaPredicted RBP3.7□□□□□ -1.82
RTN4-213ENST00000485749 PMAIP1Q13794 54 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 RGNQ15493 299 aa3.7□□□□□ -1.82
RTN4-213ENST00000485749 CEACAM16Q2WEN9 425 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms