RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 C8orf59Q8N0T1 100 aaPredicted RBP4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 SYS1Q8N2H4 156 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 C10orf105Q8TEF2 133 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 CYGBQ8WWM9 190 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 SGK3Q96BR1 496 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 AMELYQ99218 206 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 PLCXD1Q9NUJ7 323 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 FAM206AQ9NX38 181 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 DNAJC27Q9NZQ0 273 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 MYEF2Q9P2K5 600 aaKnown RBP4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 NUFIP1Q9UHK0 495 aaKnown RBP4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 IKZF2Q9UKS7 526 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 COPS3Q9UNS2 423 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 R4GMQ9 66 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 MALRD1Q5VYJ5 2156 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 CR1P17927 2039 aa4.55□□□□□ -1.68
NHLRC3-205ENST00000485407 TANC2Q9HCD6 1990 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 hCG_38984A0A1B0GV85 526 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 DAPL1A0PJW8 107 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 GGT3PA6NGU5 568 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 FAM74A7A6NL05 159 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 LOC110117498-PIK3R3F6TDL0 507 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 M0R129 80 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 SRSF10O75494 262 aaKnown RBP4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 RP2O75695 350 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 NUDT3O95989 172 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 CST4P01036 141 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 IGLV3-1P01715 115 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 FRMD6-AS1P0C7T7 363 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 HSMCR30P0CW71 290 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 SLC2A2P11168 524 aaPredicted RBP4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 PIPP12273 146 aaPredicted RBP4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 ID1P41134 155 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 CD200P41217 278 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 HCCSP53701 268 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 CCL8P80075 99 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 FAM3AP98173 230 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 IL5RAQ01344 420 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 SRSF4Q08170 494 aaKnown RBP4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 RIPPLY1Q0D2K3 151 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 SRSF9Q13242 221 aaKnown RBP eCLIP4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 MED21Q13503 144 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 FHL2Q14192 279 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 ALKBH6Q3KRA9 238 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 FAM74A3Q4VXF1 159 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 FAM76BQ5HYJ3 339 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 TMEM255AQ5JRV8 349 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 GLYATL3Q5SZD4 288 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 LIPNQ5VXI9 398 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 FAM220AQ7Z4H9 259 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 TGIF2LXQ8IUE1 241 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 ZCCHC24Q8N2G6 241 aaKnown RBP4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 ZNF525Q8N782 197 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 NRACQ8N912 160 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 OR10H4Q8NGA5 316 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 NANPQ8TBE9 248 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 APH1BQ8WW43 257 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 C10orf35Q96D05 121 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 TIMD4Q96H15 378 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 REEP6Q96HR9 211 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 NKX3-1Q99801 234 aaPredicted RBP4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 REG4Q9BYZ8 158 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 PBOV1Q9GZY1 135 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 FGF20Q9NP95 211 aaPredicted RBP4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 PTTG3PQ9NZH4 202 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 MRM2Q9UI43 246 aaKnown RBP4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 MPC1Q9Y5U8 109 aa4.54□□□□□ -1.68
NHLRC3-205ENST00000485407 TRRAPQ9Y4A5 3859 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 PCLOQ9Y6V0 5065 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 IGHV4OR15-8A0A075B7B6 117 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 A0A096LNT2 108 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 IGHV1-69-2A0A0G2JMI3 117 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 ZNF816-ZNF321PA0A0X1KG74 233 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 EFCAB10A6NFE3 127 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 CLDN25C9JDP6 229 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 PHF1O43189 567 aaPredicted RBP4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 DHRS3O75911 302 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 ATP6V1G2O95670 118 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 CLIC3O95833 236 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 PAHP00439 452 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 TTRP02766 147 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 SLPIP03973 132 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 ISG15P05161 165 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 SLC2A1P11166 492 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 MYL12AP19105 171 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 CCL1P22362 96 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 USF1P22415 310 aaPredicted RBP4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 COL8A2P25067 703 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 CFHR2P36980 270 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 VHLP40337 213 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 NR4A2P43354 598 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 TGM4P49221 684 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 TNFAIP6P98066 277 aaPredicted RBP4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 EWSR1Q01844 656 aaKnown RBP eCLIP4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 ZNF85Q03923 595 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 HAGHQ16775 308 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 CCDC58Q4VC31 144 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 TMEM244Q5VVB8 128 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 RNLSQ5VYX0 342 aa4.53□□□□□ -1.68
NHLRC3-205ENST00000485407 Q6ZR03 302 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms