RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 OR2Z1Q8NG97 314 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OR52E4Q8NGH9 312 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OR52P1PQ8NH57 321 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 C11orf40Q8WZ69 217 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 RASL10AQ92737 203 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 TAAR8Q969N4 342 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 CCL19Q99731 98 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 C1orf50Q9BV19 199 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 QTRT1Q9BXR0 403 aaKnown RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 CHIAQ9BZP6 476 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OR52A1Q9UKL2 312 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 RELNP78509 3460 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 TEX15Q9BXT5 2789 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 TRAV36DV7A0A075B6V5 113 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 C17orf51A8MQB3 221 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 SULT2B1O00204 365 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 GPR31O00270 319 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 PLAUP00749 431 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 HTR1AP08908 422 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 CST2P09228 141 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 C8orf88P0DMB2 117 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 HIST1H1CP16403 213 aaKnown RBP4.38□□□□□ -1.71
CCDC39-205ENST00000485055 GGT1P19440 569 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 AKR1D1P51857 326 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 GNG3P63215 75 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 PUDPQ08623 228 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 GAGE2BQ13066 116 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 PPP1R1AQ13522 171 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 TAB1Q15750 504 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 DUSP7Q16829 419 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 CYP51A1Q16850 503 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 GAGE2EQ4V326 116 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 SLC35D3Q5M8T2 416 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 ENTPD8Q5MY95 495 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 MRPL2Q5T653 305 aaKnown RBP4.38□□□□□ -1.71
CCDC39-205ENST00000485055 REP15Q6BDI9 236 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 GAGE2AQ6NT46 116 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 SLC25A48Q6ZT89 311 aaKnown RBP4.38□□□□□ -1.71
CCDC39-205ENST00000485055 BCDIN3DQ7Z5W3 292 aaKnown RBP4.38□□□□□ -1.71
CCDC39-205ENST00000485055 C20orf196Q8IYI0 205 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 ARRDC1Q8N5I2 433 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 OR5D16Q8NGK9 328 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 OR1K1Q8NGR3 316 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 OR56B4Q8NH76 319 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 HAVCR2Q8TDQ0 301 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 CCDC107Q8WV48 283 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 SMIM12Q96EX1 92 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 RSPO3Q9BXY4 272 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-205ENST00000485055 PPDPFQ9H3Y8 114 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 NRN1Q9NPD7 142 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 GAGE2DQ9UEU5 116 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 ANKRD17O75179 2603 aaKnown RBP4.38□□□□□ -1.71
CCDC39-205ENST00000485055 IGKV1D-42A0A075B6H8 117 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 GMNCA6NCL1 334 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 CCDC160A6NGH7 325 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 EVPLLA8MZ36 301 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 H3BMQ9 156 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 H2BFMP0C1H6 154 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 PCSK6P29122 969 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 NR4A2P43354 598 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 TGFBR3Q03167 851 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 SURF2Q15527 256 aaPredicted RBP4.38□□□□□ -1.71
CCDC39-205ENST00000485055 KIR3DL3Q8N743 410 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 SPATA3Q8NHX4 192 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 POP5Q969H6 163 aaKnown RBP4.38□□□□□ -1.71
CCDC39-205ENST00000485055 LIME1Q9H400 295 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 VDAC3Q9Y277 283 aa4.38□□□□□ -1.71
CCDC39-205ENST00000485055 FLNBO75369 2602 aaKnown RBP4.38□□□□□ -1.71
CCDC39-205ENST00000485055 HRNRQ86YZ3 2850 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-205ENST00000485055 MED13LQ71F56 2210 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 A0A1B0GU03 582 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 ANKRD20A5PA0PJZ0 165 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 FCN1O00602 326 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 CDIPTO14735 213 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 TACSTD2P09758 323 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 ESDP10768 282 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 CELP19835 753 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 RCVRNP35243 200 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 TALDO1P37837 337 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 CX3CL1P78423 397 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 MEF2DQ14814 521 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 GRK1Q15835 563 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 SMIM21Q3B7S5 101 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 C1orf140Q5VVS0 124 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 BAIAP2L2Q6UXY1 529 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 YTHDF3Q7Z739 585 aaKnown RBP4.37□□□□□ -1.71
CCDC39-205ENST00000485055 IQCF1Q8N6M8 205 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 OR6K6Q8NGW6 343 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 PIK3IP1Q96FE7 263 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 TM2D2Q9BX73 214 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 THYN1Q9P016 225 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 ISPDA4D126 451 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 TIMM23O14925 209 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 EDF1O60869 148 aaKnown RBP4.37□□□□□ -1.71
CCDC39-205ENST00000485055 ANOS1P23352 680 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 MAP2K3P46734 347 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 CDH11P55287 796 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 HPCAP84074 193 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 MS4A2Q01362 244 aa4.37□□□□□ -1.71
CCDC39-205ENST00000485055 C10orf128Q5T292 105 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms