RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ZNF184Q99676 751 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-206ENST00000484733 FAM90A10PA6NDY2 464 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 FAM90A7PA6NKC0 464 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 FAM90A23PA8MXZ1 464 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 LALBAP00709 142 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 MYL12AP19105 171 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 HOXD3P31249 432 aaPredicted RBP9.02□□□□□ -0.97
SCFD1-206ENST00000484733 RPS11P62280 158 aaKnown RBP eCLIP9.02□□□□□ -0.97
SCFD1-206ENST00000484733 FOXE3Q13461 319 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 DEFB121Q5J5C9 76 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 ATAD3CQ5T2N8 411 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 UNQ9370/PRO34162Q6UXP9 181 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 SLC25A48Q6ZT89 311 aaKnown RBP9.02□□□□□ -0.97
SCFD1-206ENST00000484733 C18orf65Q6ZTR6 163 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 KLHL30-AS1Q8NEE0 82 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 GHSRQ92847 366 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 TMEM80Q96HE8 168 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 B9D2Q9BPU9 175 aa9.02□□□□□ -0.97
SCFD1-206ENST00000484733 LINC01548A6NM66 108 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 NUDT19A8MXV4 375 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 MCRIP1C9JLW8 97 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 AIPO00170 330 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 CA11O75493 328 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 SC5DO75845 299 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 MOSP00540 346 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 CD1AP06126 327 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 ELANEP08246 267 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 KIR2DS1Q14954 304 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 C6orf183Q5T699 404 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 STEAP3Q658P3 488 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 CCDC107Q8WV48 283 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 PGLYRP3Q96LB9 341 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 S1PR3Q99500 378 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 CKLFQ9UBR5 152 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 LINC00527Q9UJ94 153 aa9.01□□□□□ -0.97
SCFD1-206ENST00000484733 A0A1W2PP11 408 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 NCBP2LA6PVI3 153 aaKnown RBP9□□□□□ -0.97
SCFD1-206ENST00000484733 C12orf77C9JDV5 145 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 SPINT2O43291 252 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 CDX1P47902 265 aaPredicted RBP9□□□□□ -0.97
SCFD1-206ENST00000484733 REG1BP48304 166 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 SLC22A6Q4U2R8 563 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 TTC23Q5W5X9 447 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 LYPD6Q86Y78 171 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 OR13C5Q8NGS8 318 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 NEK7Q8TDX7 302 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 ORAI1Q96D31 301 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 CHCHD6Q9BRQ6 235 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 C8orf4Q9NR00 106 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 CHCHD3Q9NX63 227 aaKnown RBP9□□□□□ -0.97
SCFD1-206ENST00000484733 CLEC2DQ9UHP7 191 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 MRPS28Q9Y2Q9 187 aaKnown RBP9□□□□□ -0.97
SCFD1-206ENST00000484733 IGHV3-72A0A0B4J1Y9 119 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 CCL24O00175 119 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 LANCL1O43813 399 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 VHLP40337 213 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 TAS2R43P59537 309 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 CFHR3Q02985 330 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 GPR50Q13585 617 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 CXorf66Q5JRM2 361 aaPredicted RBP9□□□□□ -0.97
SCFD1-206ENST00000484733 SYT6Q5T7P8 510 aaPredicted RBP9□□□□□ -0.97
SCFD1-206ENST00000484733 ZNF554Q86TJ5 538 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 RAX2Q96IS3 184 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 RASL11BQ9BPW5 248 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 DCLRE1BQ9H816 532 aa9□□□□□ -0.97
SCFD1-206ENST00000484733 TRAV8-7A0A075B6U6 113 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 SLC31A2O15432 143 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 RAMP3O60896 148 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 DGCR2P98153 550 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 CT45A1Q5HYN5 189 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 LY6G6FQ5SQ64 297 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 GLIPR1L1Q6UWM5 242 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 FAM71E2Q8N5Q1 922 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 PACRGLQ8N7B6 248 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 SETD9Q8NE22 299 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 CT45A3Q8NHU0 189 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 GGHQ92820 318 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 MUL1Q969V5 352 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 ETAA1Q9NY74 926 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 TRAPPC2LQ9UL33 140 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 IGHV3-43A0A0B4J1X8 118 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 RRP9O43818 475 aaKnown RBP8.99□□□□□ -0.97
SCFD1-206ENST00000484733 BAG2O95816 211 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 IGHG4P01861 327 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 IGF1P05019 195 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 IGHV3-43DP0DP04 118 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 ZNF134P52741 427 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 ADARB1P78563 741 aaKnown RBP8.99□□□□□ -0.97
SCFD1-206ENST00000484733 RAB12Q6IQ22 244 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 FAM53AQ6NSI3 398 aaPredicted RBP8.99□□□□□ -0.97
SCFD1-206ENST00000484733 OR8U1Q8NH10 309 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 UBALD1Q8TB05 177 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 THRSPQ92748 146 aa8.99□□□□□ -0.97
SCFD1-206ENST00000484733 MBNL3Q9NUK0 354 aaKnown RBP8.99□□□□□ -0.97
SCFD1-206ENST00000484733 MAGEA13PA6NCF6 341 aa8.98□□□□□ -0.97
SCFD1-206ENST00000484733 HBZP02008 142 aa8.98□□□□□ -0.97
SCFD1-206ENST00000484733 RPLP1P05386 114 aaKnown RBP8.98□□□□□ -0.97
SCFD1-206ENST00000484733 FUT3P21217 361 aa8.98□□□□□ -0.97
SCFD1-206ENST00000484733 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.98□□□□□ -0.974e-7■■■■■ 32.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms