RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 MAFIPQ8WZ33 124 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 FAM168AQ92567 244 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 OR2A7Q96R45 310 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 TMEM246Q9BRR3 403 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 HDHD3Q9BSH5 251 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-216ENST00000484087 GON7Q9BXV9 100 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 KRTAP9-9Q9BYP9 154 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 KRTAP9-4Q9BYQ2 154 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 BPESC1Q9GZL8 116 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 IFT22Q9H7X7 185 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 RCC2Q9P258 522 aaKnown RBP5.82□□□□□ -1.48
BRCA1-216ENST00000484087 HSPB11Q9Y547 144 aa5.82□□□□□ -1.48
BRCA1-216ENST00000484087 A0A0B4J2A0 478 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 IGHV3-64DA0A0J9YX35 117 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 hCG_1807616A0A1W2PRN6 198 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 WNT9BO14905 357 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 NOS1APO75052 506 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-216ENST00000484087 RHBDL1O75783 438 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 SFT2D2O95562 160 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 TK1P04183 234 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 CTSDP07339 412 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-216ENST00000484087 PGA5P0DJD9 388 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 ZBTB25P24278 435 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 EFNA4P52798 201 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 DHODHQ02127 395 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 PPP1R1AQ13522 171 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 PAN3Q58A45 887 aaKnown RBP5.81□□□□□ -1.48
BRCA1-216ENST00000484087 C17orf107Q6ZR85 190 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 MOB1BQ7L9L4 216 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 ASCC1Q8N9N2 400 aaKnown RBP5.81□□□□□ -1.48
BRCA1-216ENST00000484087 SUMF2Q8NBJ7 301 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 POC1AQ8NBT0 407 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 GRPEL2Q8TAA5 225 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 NRIP2Q9BQI9 281 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 DPCDQ9BVM2 203 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-216ENST00000484087 DCAF16Q9NXF7 216 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 TAAR3PQ9P1P4 343 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 SHPKQ9UHJ6 478 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 PFDN2Q9UHV9 154 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 KCNIP3Q9Y2W7 256 aa5.81□□□□□ -1.48
BRCA1-216ENST00000484087 POLR3KQ9Y2Y1 108 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-216ENST00000484087 TEX13DA0A0J9YY54 714 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-216ENST00000484087 OR5H14A6NHG9 310 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 ZSCAN5BA6NJL1 495 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 TRDCB7Z8K6 153 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 F8VVB4 439 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 F8VWA3 439 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 H0YL77 283 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 M0R233 179 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 HSPB6O14558 160 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 RGS13O14921 159 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 MLNRO43193 412 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 EIF4EBP3O60516 100 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-216ENST00000484087 NAPSAO96009 420 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 KNG1P01042 644 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 IGHV3-13P01766 116 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 ZNF728P0DKX0 622 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 DAOP14920 347 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 FOSL1P15407 271 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 ZNF250P15622 560 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 HLA-GP17693 338 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 GLRA1P23415 457 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 TNFSF4P23510 183 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 COL8A2P25067 703 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 DUSP1P28562 367 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 S100GP29377 79 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 FCGR2CP31995 323 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 PPOXP50336 477 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 SEC61A1P61619 476 aaKnown RBP5.8□□□□□ -1.48
BRCA1-216ENST00000484087 CCL8P80075 99 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 CYCSP99999 105 aaKnown RBP5.8□□□□□ -1.48
BRCA1-216ENST00000484087 HOXA4Q00056 320 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-216ENST00000484087 ZNF146Q15072 292 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 NDUFA5Q16718 116 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 TMEM249Q2WGJ8 235 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 SMIM21Q3B7S5 101 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 AVPI1Q5T686 147 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 AADACL3Q5VUY0 350 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 DHRS11Q6UWP2 260 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 GSG1LQ6UXU4 331 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 KCTD9Q7L273 389 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 SLC38A6Q8IZM9 456 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 ZNF565Q8N9K5 539 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 CCDC71LQ8N9Z2 235 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 ADAD2Q8NCV1 583 aaKnown RBP5.8□□□□□ -1.48
BRCA1-216ENST00000484087 OR2Z1Q8NG97 314 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 OR5T2Q8NGG2 359 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 OR5M8Q8NGP6 311 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 DYRK2Q92630 601 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 RDH5Q92781 318 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 MRGPRFQ96AM1 343 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 ZNF488Q96MN9 340 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 TMPRSS13Q9BYE2 586 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 WDR13Q9H1Z4 485 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 C5orf66Q9H5L9 145 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 CHODLQ9H9P2 273 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 BARX1Q9HBU1 254 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-216ENST00000484087 MSL2Q9HCI7 577 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 Q9N2K0 584 aa5.8□□□□□ -1.48
BRCA1-216ENST00000484087 RASL12Q9NYN1 266 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms