RNA–Protein interactions for RNA: ENST00000484084.5

RTFDC1-208, Transcript of Protein RTF2 homolog, human

TSL 5

Gene RTFDC1, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTFDC1-208	ENST00000484084	CCDC124	Q96CT7	223 aa	Known RBP	6.58	□□□□□ -1.36
RTFDC1-208	ENST00000484084	NRBF2	Q96F24	287 aa		6.58	□□□□□ -1.36
RTFDC1-208	ENST00000484084	DPCD	Q9BVM2	203 aa	Predicted RBP	6.58	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ANKRD60	Q9BZ19	345 aa		6.58	□□□□□ -1.36
RTFDC1-208	ENST00000484084	FAM107B	Q9H098	131 aa		6.58	□□□□□ -1.36
RTFDC1-208	ENST00000484084	HIPK2	Q9H2X6	1198 aa		6.58	□□□□□ -1.36
RTFDC1-208	ENST00000484084	GNG8	Q9UK08	70 aa		6.58	□□□□□ -1.36
RTFDC1-208	ENST00000484084	TCRBV3S1	A0A5B6	114 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	C12orf77	C9JDV5	145 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ORC5	O43913	435 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	MT-ND4	P03905	459 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	DBT	P11182	482 aa	Known RBP	6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ZNF20	P17024	532 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	KCNJ3	P48549	501 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	MECP2	P51608	486 aa	Known RBP	6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	IL13RA2	Q14627	380 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084		Q3ZCU0	254 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ZNF691	Q5VV52	312 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	KDM4D	Q6B0I6	523 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	TMEM65	Q6PI78	240 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	GID4	Q8IVV7	300 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	GAPT	Q8N292	157 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	NPB	Q8NG41	125 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	DNAJC9	Q8WXX5	260 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	LINC00476	Q8WZB0	136 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ARL11	Q969Q4	196 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	PELI1	Q96FA3	418 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	RHOV	Q96L33	236 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	FAM110A	Q9BQ89	295 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	TEX12	Q9BXU0	123 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	NEK6	Q9HC98	313 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	NUBP2	Q9Y5Y2	271 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	FAT2	Q9NYQ8	4349 aa		6.57	□□□□□ -1.36
RTFDC1-208	ENST00000484084	IZUMO1R	A6ND01	250 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084		E9PI62	339 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	FCN1	O00602	326 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	GEMIN2	O14893	280 aa	Known RBP	6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	SLC16A6	O15403	523 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	SULT1B1	O43704	296 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	LANCL1	O43813	399 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	NDUFA3	O95167	84 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	IGHV3-11	P01762	117 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	HSPB1	P04792	205 aa	Known RBP	6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ACTB	P60709	375 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ADARB1	P78563	741 aa	Known RBP	6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	MMD	Q15546	238 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	C5orf64	Q2M2E5	130 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	NHLRC3	Q5JS37	347 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ZNF497	Q6ZNH5	498 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	OR13C3	Q8NGS6	347 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	CCDC107	Q8WV48	283 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	RGP1	Q92546	391 aa	Predicted RBP	6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	PARP11	Q9NR21	331 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	KRT84	Q9NSB2	600 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ARGLU1	Q9NWB6	273 aa	Predicted RBP	6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	H2AFY2	Q9P0M6	372 aa	Predicted RBP	6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ARL2BP	Q9Y2Y0	163 aa		6.56	□□□□□ -1.36
RTFDC1-208	ENST00000484084		A0A1W2PP11	408 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	TMEM30CP	A0ZSE6	113 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	TXNL1	O43396	289 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	CDRT1	O95170	752 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ARSB	P15848	533 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	RBM11	P57052	281 aa	Known RBP	6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	CX3CL1	P78423	397 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	KLF5	Q13887	457 aa	Predicted RBP	6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	GNMT	Q14749	295 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	LRRC36	Q1X8D7	754 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	LPCAT4	Q643R3	524 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	LIN54	Q6MZP7	749 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	OR10V1	Q8NGI7	309 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	OR1L1	Q8NH94	360 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	NSL1	Q96IY1	281 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	LRGUK	Q96M69	825 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ZNF251	Q9BRH9	671 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	MRPL20	Q9BYC9	149 aa	Known RBP	6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ISG20L2	Q9H9L3	353 aa	Known RBP	6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	FAM118A	Q9NWS6	357 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	IL36G	Q9NZH8	169 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ADAM30	Q9UKF2	790 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	GAB2	Q9UQC2	676 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ST3GAL6	Q9Y274	331 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084	DNAH2	Q9P225	4427 aa		6.55	□□□□□ -1.36
RTFDC1-208	ENST00000484084		A0A1W2PN81	502 aa		6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	RBMY1B	A6NDE4	496 aa	Known RBP	6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	RBMY1E	A6NEQ0	496 aa	Known RBP	6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	NBR2	O15453	112 aa		6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	RGS11	O94810	467 aa		6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	BRI3	O95415	125 aa		6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	RBMY1D	P0C7P1	496 aa	Known RBP	6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	RCC1	P18754	421 aa	Predicted RBP	6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	CHRNA7	P36544	502 aa		6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	MNAT1	P51948	309 aa		6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	SSBP2	P81877	361 aa	Predicted RBP	6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	PITPNA	Q00169	270 aa		6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	TMED1	Q13445	227 aa		6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ALKBH1	Q13686	389 aa	Known RBP	6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	MORN2	Q502X0	79 aa		6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	STEAP3	Q658P3	488 aa		6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	CD200R1L	Q6Q8B3	271 aa		6.54	□□□□□ -1.36
RTFDC1-208	ENST00000484084	ZNF833P	Q6ZTB9	187 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms