RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 H7C1C5 153 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 K7EQM0 130 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 AGFG2O95081 481 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 CBLN1P23435 193 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 GATA2P23769 480 aaPredicted RBP6.74□□□□□ -1.33
COL4A5-205ENST00000483338 GATA3P23771 443 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 TCTEX1D4Q5JR98 221 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 ZNF793Q6ZN11 406 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 CHRDL1Q9BU40 450 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 SSBP4Q9BWG4 385 aaPredicted RBP6.74□□□□□ -1.33
COL4A5-205ENST00000483338 PLEKHF2Q9H8W4 249 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 PLEK2Q9NYT0 353 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 PEF1Q9UBV8 284 aaKnown RBP6.74□□□□□ -1.33
COL4A5-205ENST00000483338 B4GALT6Q9UBX8 382 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 HCFC2Q9Y5Z7 792 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 NDUFS4O43181 175 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 POU2F2P09086 479 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 GLI4P10075 376 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 CCNOP22674 350 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 DUSP1P28562 367 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 WASP42768 502 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 AMTP48728 403 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 DNASE1L1P49184 302 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 TMEM187Q14656 261 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 MEP1BQ16820 701 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 C1orf140Q5VVS0 124 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 RSPO2Q6UXX9 243 aaPredicted RBP6.74□□□□□ -1.33
COL4A5-205ENST00000483338 TMEM252Q8N6L7 170 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 OR4A5Q8NH83 315 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 PLD4Q96BZ4 506 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 EAF1Q96JC9 268 aaPredicted RBP6.74□□□□□ -1.33
COL4A5-205ENST00000483338 SDF2Q99470 211 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 NRTNQ99748 197 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 RTN4RQ9BZR6 473 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 NKX2-4Q9H2Z4 354 aa6.74□□□□□ -1.33
COL4A5-205ENST00000483338 EDDM13A0A1B0GTR0 161 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 KLRC4-KLRK1H3BQV0 150 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 HNRNPA1P09651 372 aaKnown RBP eCLIP6.73□□□□□ -1.33
COL4A5-205ENST00000483338 HIST1H1DP16402 221 aaKnown RBP6.73□□□□□ -1.33
COL4A5-205ENST00000483338 TMEM50BP56557 158 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 MEF2BQ02080 365 aaPredicted RBP6.73□□□□□ -1.33
COL4A5-205ENST00000483338 Q0VG73 95 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 GPM6BQ13491 265 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 ZNF74Q16587 644 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 HNRNPA1L2Q32P51 320 aaKnown RBP6.73□□□□□ -1.33
COL4A5-205ENST00000483338 IGF2-ASQ6U949 168 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 ZNF788Q6ZQV5 615 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 OR2AE1Q8NHA4 323 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 WFDC5Q8TCV5 224 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 MBD3L1Q8WWY6 194 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 ST6GALNAC6Q969X2 333 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 FAM60AQ9NP50 221 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 TDRD6O60522 2096 aaKnown RBP6.73□□□□□ -1.33
COL4A5-205ENST00000483338 TRAV9-2A0A087WT02 112 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.73□□□□□ -1.33
COL4A5-205ENST00000483338 K7EQS6 105 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 M0R1X1 148 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 CD5LO43866 347 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 ZNF737O75373 536 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 PMCHP20382 165 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 SNU13P55769 128 aaKnown RBP6.73□□□□□ -1.33
COL4A5-205ENST00000483338 PSG4Q00888 419 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 SLC18B1Q6NT16 456 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 OR10V1Q8NGI7 309 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 ABHD17AQ96GS6 310 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 FNDC4Q9H6D8 234 aaPredicted RBP6.73□□□□□ -1.33
COL4A5-205ENST00000483338 HTTP42858 3142 aa6.73□□□□□ -1.33
COL4A5-205ENST00000483338 ZNF840PA6NDX5 716 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 C1QTNF9P0C862 333 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 ERGP11308 486 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 CSNK2A2P19784 350 aaPredicted RBP6.72□□□□□ -1.33
COL4A5-205ENST00000483338 CD70P32970 193 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 GPR1P46091 355 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 HSD52Q0P140 79 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 FOXL1Q12952 345 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 TMEM249Q2WGJ8 235 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 TSPO2Q5TGU0 170 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 STUMQ69YW2 141 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 TPRG1Q6ZUI0 275 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 RNF144BQ7Z419 303 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 C18orf12Q96KH6 178 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 SIGLEC12Q96PQ1 595 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 PECRQ9BY49 303 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 AICDAQ9GZX7 198 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 MRPL18Q9H0U6 180 aaKnown RBP6.72□□□□□ -1.33
COL4A5-205ENST00000483338 GNB4Q9HAV0 340 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 A0A1W2PS18 150 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 FAM231BA6NCW3 169 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 CCL16O15467 120 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 CGAP01215 116 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 SMIM17P0DL12 118 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 FBLP22087 321 aaKnown RBP6.72□□□□□ -1.33
COL4A5-205ENST00000483338 NTSR1P30989 418 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 PLP1P60201 277 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 SLC39A11Q8N1S5 342 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 SGMS2Q8NHU3 365 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 KCNG3Q8TAE7 436 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 SLC25A40Q8TBP6 338 aa6.72□□□□□ -1.33
COL4A5-205ENST00000483338 LIN37Q96GY3 246 aaPredicted RBP6.72□□□□□ -1.33
COL4A5-205ENST00000483338 RCHY1Q96PM5 261 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms