RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CA2P00918 260 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 IFNA14P01570 189 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 GP1BAP07359 652 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 KRT7P08729 469 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 SCGB1C2P0DMR2 95 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 G0S2P27469 103 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 HSD11B1P28845 292 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 TSPOP30536 169 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 CAPZBP47756 277 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 VSNL1P62760 191 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 REEP5Q00765 189 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 DHRS2Q13268 280 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 PDK2Q15119 407 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 ZIC4Q8N9L1 334 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 OR5D18Q8NGL1 313 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 SCGB1C1Q8TD33 95 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 SUCNR1Q9BXA5 334 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 ULBP1Q9BZM6 244 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 MAT2BQ9NZL9 334 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 C3orf18Q9UK00 162 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 PRDM2Q13029 1718 aa2.51□□□□□ -2.01
SF3B1-210ENST00000482158 IGKV1D-37A0A075B6S9 117 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 ARGFXA6NJG6 315 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 E5RI56 91 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 F8VP50 259 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 PLPP3O14495 311 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 PDCD6O75340 191 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 OR4E1P0C645 316 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 GTF2F2P13984 249 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 GABRA1P14867 456 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 SYT1P21579 422 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 ALDH3A1P30838 453 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 MAGEA3P43357 314 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 MAGEA6P43360 314 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 CXCR4P61073 352 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 ZBTB6Q15916 424 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 CEACAM21Q3KPI0 293 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 HBMQ6B0K9 141 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 LYPD6Q86Y78 171 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 FUNDC1Q8IVP5 155 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 CPNE9Q8IYJ1 553 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 TMEM156Q8N614 296 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 Q8NAQ8 132 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 DTD1Q8TEA8 209 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 TWIST2Q8WVJ9 160 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 TMEM239Q8WW34 195 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 CEP19Q96LK0 163 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 SERPINB11Q96P15 392 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 TSSK6Q9BXA6 273 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 RHOFQ9HBH0 211 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 TAS2R9Q9NYW1 312 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 FADS3Q9Y5Q0 445 aa2.5□□□□□ -2.01
SF3B1-210ENST00000482158 CPDO75976 1380 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 TMEM114B3SHH9 223 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 TCF21O43680 179 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 LYPLA2O95372 231 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 ASS1P00966 412 aaKnown RBP2.49□□□□□ -2.01
SF3B1-210ENST00000482158 HMGN1P05114 100 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 IDO1P14902 403 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 CTLA4P16410 223 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 ELK4P28324 431 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 KDELR2P33947 212 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 UGT2B10P36537 528 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 MAGEA2P43356 314 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 RPL14P50914 215 aaKnown RBP2.49□□□□□ -2.01
SF3B1-210ENST00000482158 ZNF83P51522 516 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 MAGOHP61326 146 aaKnown RBP2.49□□□□□ -2.01
SF3B1-210ENST00000482158 ERVS71-1P61550 626 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 ARF6P62330 175 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 MRPS25P82663 173 aaKnown RBP2.49□□□□□ -2.01
SF3B1-210ENST00000482158 TRAM1Q15629 374 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 IMPG1Q17R60 797 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 SSX6Q7RTT6 188 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 TAC4Q86UU9 113 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 CRLF3Q8IUI8 442 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 DNAJB3Q8WWF6 145 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 APOBEC3DQ96AK3 386 aaPredicted RBP2.49□□□□□ -2.01
SF3B1-210ENST00000482158 PYURFQ96I23 114 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 PACRGQ96M98 296 aaPredicted RBP2.49□□□□□ -2.01
SF3B1-210ENST00000482158 TRIB3Q96RU7 358 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 PITX2Q99697 317 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 IFT46Q9NQC8 304 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 U3KQK5 164 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 ADGRL3Q9HAR2 1447 aa2.49□□□□□ -2.01
SF3B1-210ENST00000482158 IGHV2-26A0A0B4J1V2 119 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 A0A1B0GU33 70 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 FUOMA2VDF0 154 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 SMIM23A6NLE4 172 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 TMEM238C9JI98 176 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 LDOC1O95751 146 aaPredicted RBP2.48□□□□□ -2.01
SF3B1-210ENST00000482158 COX5BP10606 129 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 SLC2A1P11166 492 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 UBE2KP61086 200 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 HBG1P69891 147 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 HBG2P69892 147 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 MGAT3Q09327 533 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 MED21Q13503 144 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 SPCS2Q15005 226 aa2.48□□□□□ -2.01
SF3B1-210ENST00000482158 LGALSLQ3ZCW2 172 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms