RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 ABHD14AQ9BUJ0 271 aa13.08□□□□□ -0.32
C9orf3-218ENST00000482056 OR51I2Q9H344 312 aa13.08□□□□□ -0.32
C9orf3-218ENST00000482056 TREM2Q9NZC2 230 aa13.08□□□□□ -0.32
C9orf3-218ENST00000482056 METTL1Q9UBP6 276 aaKnown RBP13.08□□□□□ -0.32
C9orf3-218ENST00000482056 J3QW42 95 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 NXPH3O95157 252 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 ARG1P05089 322 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 SP1P08047 785 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 CA6P23280 308 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 MAS1LP35410 378 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 MPLP40238 635 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 WNT5AP41221 380 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 ZNF506Q5JVG8 444 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 ODF3L1Q8IXM7 274 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 SCGB1C1Q8TD33 95 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 IL1F10Q8WWZ1 152 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 TCEAL3Q969E4 200 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 HIPK2Q9H2X6 1198 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 hCG_1809904A0A1W2PP81 198 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 A0A1W2PPE2 198 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 A0A1W2PR64 198 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 A0A1W2PRV1 198 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 SRP19P09132 144 aaKnown RBP13.07□□□□□ -0.32
C9orf3-218ENST00000482056 PSG2P11465 335 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 PAX9P55771 341 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 MRPL49Q13405 166 aaKnown RBP13.07□□□□□ -0.32
C9orf3-218ENST00000482056 SLC10A1Q14973 349 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 HAGHQ16775 308 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 TBC1D28Q2M2D7 210 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 OR2T2Q6IF00 324 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 OR51B6Q9H340 312 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 LIN7CQ9NUP9 197 aaKnown RBP13.07□□□□□ -0.32
C9orf3-218ENST00000482056 PRSS50Q9UI38 385 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 POLDIP2Q9Y2S7 368 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 RBM7Q9Y580 266 aaKnown RBP13.07□□□□□ -0.32
C9orf3-218ENST00000482056 WSB1Q9Y6I7 421 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 ARHGAP21Q5T5U3 1957 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 CFAP54Q96N23 3096 aa13.07□□□□□ -0.32
C9orf3-218ENST00000482056 H3BQ15 152 aa13.06□□□□□ -0.32
C9orf3-218ENST00000482056 SLC33A1O00400 549 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-218ENST00000482056 TXNL1O43396 289 aa13.06□□□□□ -0.32
C9orf3-218ENST00000482056 SCAF4O95104 1147 aaKnown RBP13.06□□□□□ -0.32
C9orf3-218ENST00000482056 UBE2KP61086 200 aa13.06□□□□□ -0.32
C9orf3-218ENST00000482056 RUNX1Q01196 453 aa13.06□□□□□ -0.32
C9orf3-218ENST00000482056 FBXW9Q5XUX1 488 aa13.06□□□□□ -0.32
C9orf3-218ENST00000482056 ADAM5Q6NVV9 412 aa13.06□□□□□ -0.32
C9orf3-218ENST00000482056 C17orf78Q8N4C9 275 aa13.06□□□□□ -0.32
C9orf3-218ENST00000482056 BCL2L2Q92843 193 aaPredicted RBP13.06□□□□□ -0.32
C9orf3-218ENST00000482056 C12orf49Q9H741 205 aa13.06□□□□□ -0.32
C9orf3-218ENST00000482056 RNF150Q9ULK6 438 aa13.06□□□□□ -0.32
C9orf3-218ENST00000482056 LIPGQ9Y5X9 500 aa13.06□□□□□ -0.32
C9orf3-218ENST00000482056 RFNGQ9Y644 331 aa13.06□□□□□ -0.32
C9orf3-218ENST00000482056 A0A087WWC5 75 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 LILRA1O75019 489 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 ACAA1P09110 424 aaPredicted RBP13.05□□□□□ -0.32
C9orf3-218ENST00000482056 CD200P41217 278 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 RPS23P62266 143 aaKnown RBP13.05□□□□□ -0.32
C9orf3-218ENST00000482056 C3AR1Q16581 482 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 KHDC3LQ587J8 217 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 Q6P435 159 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 MDP1Q86V88 176 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 THNSL2Q86YJ6 484 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 C1QL4Q86Z23 238 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 FER1L6-AS2Q96M78 137 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 TRAPPC2LQ9UL33 140 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 TRAV1-1A0A0B4J248 108 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 A0A0G2JRQ6 117 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 RNF212BA8MTL3 300 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 CD46P15529 392 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 TAGLN2P37802 199 aaKnown RBP13.05□□□□□ -0.32
C9orf3-218ENST00000482056 CEBPGP53567 150 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 ICAM4Q14773 271 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 TGIF1Q15583 401 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 ZNF429Q86V71 674 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 TVP23CQ96ET8 276 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 NIPSNAP3BQ9BS92 247 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 ARRDC1-AS1Q9H2J1 176 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 GP6Q9HCN6 339 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 KCNS2Q9ULS6 477 aa13.05□□□□□ -0.32
C9orf3-218ENST00000482056 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.04□□□□□ -0.32
C9orf3-218ENST00000482056 SYNGR2O43760 224 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 RHBDL1O75783 438 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 IL18BPO95998 194 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 ZNF806P0C7X5 589 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 HBG1P69891 147 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 HBG2P69892 147 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 CTAG1AP78358 180 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 TMEM267Q0VDI3 215 aaPredicted RBP13.04□□□□□ -0.32
C9orf3-218ENST00000482056 FABP9Q0Z7S8 132 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 ZNF497Q6ZNH5 498 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 CLDND2Q8NHS1 167 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 TCTEX1D2Q8WW35 142 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 OR1A1Q9P1Q5 309 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 CACNG5Q9UF02 275 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 WDFY3Q8IZQ1 3526 aa13.04□□□□□ -0.32
C9orf3-218ENST00000482056 SIRPB1O00241 398 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 SH2D1BO14796 132 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 MT-CO3P00414 261 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 SPATA46Q5T0L3 261 aa13.03□□□□□ -0.32
C9orf3-218ENST00000482056 SP5Q6BEB4 398 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms