RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 TBC1D26Q86UD7 250 aa13.28□□□□□ -0.28
RXRA-202ENST00000481739 WFDC8Q8IUA0 241 aa13.28□□□□□ -0.28
RXRA-202ENST00000481739 BVESQ8NE79 360 aa13.28□□□□□ -0.28
RXRA-202ENST00000481739 OR11L1Q8NGX0 322 aa13.28□□□□□ -0.28
RXRA-202ENST00000481739 PLPPR1Q8TBJ4 325 aa13.28□□□□□ -0.28
RXRA-202ENST00000481739 ABHD14BQ96IU4 210 aa13.28□□□□□ -0.28
RXRA-202ENST00000481739 AKR1E2Q96JD6 320 aa13.28□□□□□ -0.28
RXRA-202ENST00000481739 PLEKHA2Q9HB19 425 aa13.28□□□□□ -0.28
RXRA-202ENST00000481739 ERRFI1Q9UJM3 462 aaPredicted RBP13.28□□□□□ -0.28
RXRA-202ENST00000481739 H0Y980 276 aa13.27□□□□□ -0.28
RXRA-202ENST00000481739 UCP1P25874 307 aa13.27□□□□□ -0.28
RXRA-202ENST00000481739 SP6Q3SY56 376 aa13.27□□□□□ -0.28
RXRA-202ENST00000481739 ZNF818PQ6ZRF7 136 aa13.27□□□□□ -0.28
RXRA-202ENST00000481739 C22orf34Q6ZV56 151 aa13.27□□□□□ -0.28
RXRA-202ENST00000481739 GALNT11Q8NCW6 608 aa13.27□□□□□ -0.28
RXRA-202ENST00000481739 OR1S1Q8NH92 325 aa13.27□□□□□ -0.28
RXRA-202ENST00000481739 CA5BP1Q8WTZ4 195 aa13.27□□□□□ -0.28
RXRA-202ENST00000481739 TP53RKQ96S44 253 aa13.27□□□□□ -0.28
RXRA-202ENST00000481739 MSL2Q9HCI7 577 aa13.27□□□□□ -0.28
RXRA-202ENST00000481739 OR5AC2Q9NZP5 309 aa13.27□□□□□ -0.28
RXRA-202ENST00000481739 PFDN2Q9UHV9 154 aa13.27□□□□□ -0.28
RXRA-202ENST00000481739 UBE2J1Q9Y385 318 aaPredicted RBP13.27□□□□□ -0.28
RXRA-202ENST00000481739 DIDO1Q9BTC0 2240 aaKnown RBP13.27□□□□□ -0.29
RXRA-202ENST00000481739 IGKV1D-13A0A0B4J2D9 117 aa13.27□□□□□ -0.29
RXRA-202ENST00000481739 NKX2-6A6NCS4 301 aa13.27□□□□□ -0.29
RXRA-202ENST00000481739 E5RGE8 158 aa13.27□□□□□ -0.29
RXRA-202ENST00000481739 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.27□□□□□ -0.29
RXRA-202ENST00000481739 IGKV1-13P0DP09 117 aa13.27□□□□□ -0.29
RXRA-202ENST00000481739 UQCRFS1P47985 274 aa13.27□□□□□ -0.29
RXRA-202ENST00000481739 TRAT1Q6PIZ9 186 aa13.27□□□□□ -0.29
RXRA-202ENST00000481739 ZNF695Q8IW36 515 aa13.27□□□□□ -0.29
RXRA-202ENST00000481739 OR10V1Q8NGI7 309 aa13.27□□□□□ -0.29
RXRA-202ENST00000481739 RRNAD1Q96FB5 475 aaKnown RBP13.27□□□□□ -0.29
RXRA-202ENST00000481739 NSG2Q9Y328 171 aa13.27□□□□□ -0.29
RXRA-202ENST00000481739 CFAP46Q8IYW2 2715 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 hCG_1807616A0A1W2PRN6 198 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 SNTB1Q13884 538 aaKnown RBP13.26□□□□□ -0.29
RXRA-202ENST00000481739 BEX5Q5H9J7 111 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 PRAMEF6Q5VXH4 476 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 TMEM268Q5VZI3 342 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 TMEM108Q6UXF1 575 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 LYZL2Q7Z4W2 148 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 FAM71E2Q8N5Q1 922 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 NUP37Q8NFH4 326 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 OR2Z1Q8NG97 314 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 OR5D13Q8NGL4 314 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 TMEM171Q8WVE6 324 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 LRRC46Q96FV0 321 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 OR14J1Q9UGF5 321 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 FZR1Q9UM11 496 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 SESN1Q9Y6P5 492 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 EPG5Q9HCE0 2579 aa13.26□□□□□ -0.29
RXRA-202ENST00000481739 SMG1Q96Q15 3661 aaKnown RBP13.25□□□□□ -0.29
RXRA-202ENST00000481739 OOEPA6NGQ2 149 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 SRRM5B3KS81 715 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 K7EPK0 472 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 HSPA12AO43301 675 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 EIF5AL1Q6IS14 154 aaKnown RBP13.25□□□□□ -0.29
RXRA-202ENST00000481739 ZNF826PQ6ZT77 177 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 BAP18Q8IXM2 172 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 SLC35G3Q8N808 338 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 PPP1R35Q8TAP8 253 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 RBPMSQ93062 196 aaKnown RBP13.25□□□□□ -0.29
RXRA-202ENST00000481739 DNTTIP1Q9H147 329 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 TAF9BQ9HBM6 251 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 CCL28Q9NRJ3 127 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 DUSP13Q9UII6 198 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 CLEC18AA5D8T8 446 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 ST8SIA3O43173 380 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 HEXAP06865 529 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 VDAC1P21796 283 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 PTAFRP25105 342 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 F2RP25116 425 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 CD40P25942 277 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 GATA4P43694 442 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 MSMO1Q15800 293 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 GPR157Q5UAW9 335 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 MEX3BQ6ZN04 569 aaKnown RBP13.25□□□□□ -0.29
RXRA-202ENST00000481739 CLEC18CQ8NCF0 446 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 ANGPTL6Q8NI99 470 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 FAM216AQ8WUB2 273 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 LRRC29Q8WV35 223 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 IL1F10Q8WWZ1 152 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 RNASE6Q93091 150 aaKnown RBP13.25□□□□□ -0.29
RXRA-202ENST00000481739 TOLLIPQ9H0E2 274 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 KCNJ16Q9NPI9 418 aa13.25□□□□□ -0.29
RXRA-202ENST00000481739 HSD17B6O14756 317 aa13.24□□□□□ -0.29
RXRA-202ENST00000481739 PSPNO60542 156 aa13.24□□□□□ -0.29
RXRA-202ENST00000481739 PGLYRP1O75594 196 aaPredicted RBP13.24□□□□□ -0.29
RXRA-202ENST00000481739 THBDP07204 575 aa13.24□□□□□ -0.29
RXRA-202ENST00000481739 HKR1P10072 659 aa13.24□□□□□ -0.29
RXRA-202ENST00000481739 RPL12P30050 165 aaKnown RBP13.24□□□□□ -0.29
RXRA-202ENST00000481739 C4orf17Q53FE4 359 aa13.24□□□□□ -0.29
RXRA-202ENST00000481739 ZBTB34Q8NCN2 500 aa13.24□□□□□ -0.29
RXRA-202ENST00000481739 LHFPL5Q8TAF8 219 aa13.24□□□□□ -0.29
RXRA-202ENST00000481739 ERGIC1Q969X5 290 aa13.24□□□□□ -0.29
RXRA-202ENST00000481739 GALMQ96C23 342 aa13.24□□□□□ -0.29
RXRA-202ENST00000481739 WFIKKN1Q96NZ8 548 aa13.24□□□□□ -0.29
RXRA-202ENST00000481739 UFSP2Q9NUQ7 469 aa13.24□□□□□ -0.29
RXRA-202ENST00000481739 ZFYVE26Q68DK2 2539 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms