RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 C18orf15Q96N68 181 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 CALN1Q9BXU9 219 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 PECRQ9BY49 303 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 SAMD10Q9BYL1 202 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 SLC22A4Q9H015 551 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 OR51E2Q9H255 320 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 ABCC13Q9NSE7 274 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 RARRES3Q9UL19 164 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 ADGRG4Q8IZF6 3080 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 RBFOX3A6NFN3 312 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 H3BNH8 94 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 C15orf65H3BRN8 121 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 M0R036 132 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 FFAR1O14842 300 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 KLF7O75840 302 aaPredicted RBP2.47□□□□□ -2.01
SMC6-208ENST00000481708 GATBO75879 557 aaKnown RBP2.47□□□□□ -2.01
SMC6-208ENST00000481708 GDF1P27539 372 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 SSTR5P35346 364 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 SERPINB5P36952 375 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 RPL26P61254 145 aaKnown RBP2.47□□□□□ -2.01
SMC6-208ENST00000481708 IFITM2Q01629 132 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 OR2F1Q13607 317 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 RWDD4Q6NW29 188 aaKnown RBP2.47□□□□□ -2.01
SMC6-208ENST00000481708 SPSB3Q6PJ21 355 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 FAM231DQ6ZW35 169 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 TMEM144Q7Z5S9 345 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 VSIG2Q96IQ7 327 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 ZNF778Q96MU6 729 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 APOL4Q9BPW4 351 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 TMEM204Q9BSN7 226 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 OCR1Q9BZK8 76 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 DSN1Q9H410 356 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 C12orf4Q9NQ89 552 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 DIABLOQ9NR28 239 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 CCL28Q9NRJ3 127 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 RPL26L1Q9UNX3 145 aaKnown RBP2.47□□□□□ -2.01
SMC6-208ENST00000481708 COL6A6A6NMZ7 2263 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 LRBAP50851 2863 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 SOCS2O14508 198 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 TAAR5O14804 337 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 UBDO15205 165 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 CHP2O43745 196 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 DHRS3O75911 302 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 SNAP29O95721 258 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 IGHV3-48P01763 117 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 CST2P09228 141 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 GFAPP14136 432 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 RAB5AP20339 215 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 PON3Q15166 354 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 YIF1BQ5BJH7 314 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 MESTQ5EB52 335 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 NHLRC3Q5JS37 347 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 SPATA31B1PQ5VZV4 182 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 SLC30A8Q8IWU4 369 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 ASB13Q8WXK3 278 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 ATOH8Q96SQ7 321 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 TAPBPLQ9BX59 468 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 SLC29A3Q9BZD2 475 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 CHST5Q9GZS9 411 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 TRABDQ9H4I3 376 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 TMEM9Q9P0T7 183 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 ZNF391Q9UJN7 358 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 PRELID3BQ9Y3B1 194 aa2.47□□□□□ -2.01
SMC6-208ENST00000481708 A6NDN8 102 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 H0Y9J4 135 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 RENP00797 406 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 OR4Q2P0C623 313 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 CXCL2P19875 107 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 PFN2P35080 140 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 P2RY4P51582 365 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 EFNA3P52797 238 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 OR12D2P58182 307 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 DSCR9P59020 149 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 APOFQ13790 326 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 RUSC1-AS1Q66K80 236 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 MRPL55Q7Z7F7 128 aaKnown RBP2.46□□□□□ -2.01
SMC6-208ENST00000481708 PRNTQ86SH4 94 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 OR6N1Q8NGY5 312 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 FAM45AQ8TCE6 357 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 VAT1Q99536 393 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 ZNF226Q9NYT6 803 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 ANXA10Q9UJ72 324 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 KLHL21Q9UJP4 597 aa2.46□□□□□ -2.01
SMC6-208ENST00000481708 A0A0J9YXV3 536 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 KRTAP4-16G5E9R7 235 aaPredicted RBP2.46□□□□□ -2.02
SMC6-208ENST00000481708 PSMD12O00232 456 aaPredicted RBP2.46□□□□□ -2.02
SMC6-208ENST00000481708 PFDN6O15212 129 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 GABRA1P14867 456 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 TCN2P20062 427 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 PYCR1P32322 319 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 HENMT1Q5T8I9 393 aaKnown RBP2.46□□□□□ -2.02
SMC6-208ENST00000481708 TSPO2Q5TGU0 170 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 LPCAT4Q643R3 524 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 STEAP4Q687X5 459 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 CDC20BQ86Y33 519 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 RERGQ96A58 199 aaPredicted RBP2.46□□□□□ -2.02
SMC6-208ENST00000481708 RIOK2Q9BVS4 552 aaKnown RBP2.46□□□□□ -2.02
SMC6-208ENST00000481708 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
SMC6-208ENST00000481708 DDX19AQ9NUU7 478 aaKnown RBP2.46□□□□□ -2.02
SMC6-208ENST00000481708 KCNIP1Q9NZI2 227 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms