RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 NOX3Q9HBY0 568 aa3.24□□□□□ -1.89
UPF3A-207ENST00000481131 SAR1AQ9NR31 198 aa3.24□□□□□ -1.89
UPF3A-207ENST00000481131 CCDC59Q9P031 241 aaKnown RBP3.24□□□□□ -1.89
UPF3A-207ENST00000481131 DUX4Q9UBX2 424 aa3.24□□□□□ -1.89
UPF3A-207ENST00000481131 UTP20O75691 2785 aaKnown RBP3.24□□□□□ -1.89
UPF3A-207ENST00000481131 MYO18BQ8IUG5 2567 aa3.24□□□□□ -1.89
UPF3A-207ENST00000481131 INTS1Q8N201 2190 aaKnown RBP3.24□□□□□ -1.89
UPF3A-207ENST00000481131 RP1L1Q8IWN7 2480 aaPredicted RBP3.24□□□□□ -1.89
UPF3A-207ENST00000481131 HELZ2Q9BYK8 2649 aaKnown RBP3.23□□□□□ -1.89
UPF3A-207ENST00000481131 DOPEY2Q9Y3R5 2298 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 FASNP49327 2511 aaKnown RBP3.23□□□□□ -1.89
UPF3A-207ENST00000481131 A0A096LPI6 279 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 IGHV3-66A0A0C4DH42 116 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 GMNCA6NCL1 334 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 OR6C70A6NIJ9 312 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 CLDN24A6NM45 220 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 FXYD1O00168 92 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 HMGN4O00479 90 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 RFXANKO14593 260 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 TP53I11O14683 189 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 ACOX3O15254 700 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 ANGPTL7O43827 346 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 FADS1O60427 444 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 CDC40O60508 579 aaKnown RBP eCLIP3.23□□□□□ -1.89
UPF3A-207ENST00000481131 GLSO94925 669 aaPredicted RBP3.23□□□□□ -1.89
UPF3A-207ENST00000481131 RAB3DO95716 219 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 IL6P05231 212 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 BCHEP06276 602 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 IFI6P09912 130 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 OR5H8P0DN80 308 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 ZNF823P16415 610 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 EVI2BP34910 448 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 RPS5P46782 204 aaKnown RBP3.23□□□□□ -1.89
UPF3A-207ENST00000481131 MRPL19P49406 292 aaKnown RBP3.23□□□□□ -1.89
UPF3A-207ENST00000481131 MTPNP58546 118 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 PLGLB1Q02325 96 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 MAB21L1Q13394 359 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 ZNHIT3Q15649 155 aaPredicted RBP3.23□□□□□ -1.89
UPF3A-207ENST00000481131 MAPK14Q16539 360 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 OR52W1Q6IF63 320 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 MARCH3Q86UD3 253 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 TMEM251Q8N6I4 163 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 CDRT4Q8N9R6 151 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 ZFP62Q8NB50 900 aaPredicted RBP3.23□□□□□ -1.89
UPF3A-207ENST00000481131 OR5M1Q8NGP8 315 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 MAL2Q969L2 176 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 RCN3Q96D15 328 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 NEURL3Q96EH8 262 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 DOHHQ9BU89 302 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 RSPO3Q9BXY4 272 aaPredicted RBP3.23□□□□□ -1.89
UPF3A-207ENST00000481131 ANGPTL4Q9BY76 406 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 PIGUQ9H490 435 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 VAPAQ9P0L0 249 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 TBC1D24Q9ULP9 559 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 CFL2Q9Y281 166 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 KLF13Q9Y2Y9 288 aaPredicted RBP3.23□□□□□ -1.89
UPF3A-207ENST00000481131 WIF1Q9Y5W5 379 aa3.23□□□□□ -1.89
UPF3A-207ENST00000481131 USP9XQ93008 2570 aaPredicted RBP3.23□□□□□ -1.89
UPF3A-207ENST00000481131 POLEQ07864 2286 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 LOC100653049A0A140TA62 436 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 A0A1W2PP18 115 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 INS-IGF2F8WCM5 200 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 SMKR1H3BMG3 65 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 KLRC4-KLRK1H3BQV0 150 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 MRASO14807 208 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 SNAI2O43623 268 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 SHOX2O60902 331 aaPredicted RBP3.22□□□□□ -1.89
UPF3A-207ENST00000481131 FKBP6O75344 327 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 KRT34O76011 436 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 COX4I1P13073 169 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 CEACAM6P40199 344 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 CRATP43155 626 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 PPOXP50336 477 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 DSTNP60981 165 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 ZNF117Q03924 483 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 IL18Q14116 193 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 TRAM2Q15035 370 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 RGNQ15493 299 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 TOMM34Q15785 309 aaPredicted RBP3.22□□□□□ -1.89
UPF3A-207ENST00000481131 ARHGAP11BQ3KRB8 267 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 CEMP1Q6PRD7 247 aaPredicted RBP3.22□□□□□ -1.89
UPF3A-207ENST00000481131 FBXW12Q6X9E4 464 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 ZFP2Q6ZN57 461 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 SSX9Q7RTT3 188 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 COMTD1Q86VU5 262 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 RPRMLQ8N4K4 120 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 NATD1Q8N6N6 113 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 FAM86B1Q8N7N1 296 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 BPIFCQ8NFQ6 507 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 OR2M3Q8NG83 312 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 OR1J4Q8NGS1 313 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 OR52E5Q8NH55 327 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 ROPN1LQ96C74 230 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 STACQ99469 402 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 SDF2Q99470 211 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 CGREF1Q99674 301 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 SIKE1Q9BRV8 207 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 TBL1XR1Q9BZK7 514 aa3.22□□□□□ -1.89
UPF3A-207ENST00000481131 ACTR3CQ9C0K3 210 aaPredicted RBP3.22□□□□□ -1.89
UPF3A-207ENST00000481131 NSRP1Q9H0G5 558 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms