RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 TP53RKQ96S44 253 aa12.23□□□□□ -0.45
PKNOX1-206ENST00000480179 TAF9BQ9HBM6 251 aa12.23□□□□□ -0.45
PKNOX1-206ENST00000480179 DNAJB11Q9UBS4 358 aa12.23□□□□□ -0.45
PKNOX1-206ENST00000480179 UBQLN2Q9UHD9 624 aa12.23□□□□□ -0.45
PKNOX1-206ENST00000480179 WIPI2Q9Y4P8 454 aa12.23□□□□□ -0.45
PKNOX1-206ENST00000480179 ICE1Q9Y2F5 2266 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 PLCE1Q9P212 2302 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 RNF222A6NCQ9 220 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 FAM90A27PA6NNH2 459 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 POM121CA8CG34 1229 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 SRRM5B3KS81 715 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 HSPA12AO43301 675 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 KCNJ3P48549 501 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 TNFAIP6P98066 277 aaPredicted RBP12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 HMGN3Q15651 99 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 ADAM5Q6NVV9 412 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 LDLRAD3Q86YD5 345 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 PCNPQ8WW12 178 aaKnown RBP12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 COQ2Q96H96 371 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 WFIKKN1Q96NZ8 548 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 KCNIP1Q9NZI2 227 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 FBXO9Q9UK97 447 aaPredicted RBP12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 OR2W1Q9Y3N9 320 aa12.22□□□□□ -0.45
PKNOX1-206ENST00000480179 A0A0D9SG52 128 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 C3orf85A0A1B0GTC6 90 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 H0YIZ8 118 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 TNFSF12O43508 249 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 OR2F2O95006 317 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 IGHV1-46P01743 117 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 PRDX2P32119 198 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 CD80P33681 288 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 GABRA2P47869 451 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 ASCL1P50553 236 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 RND3P61587 244 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 OR2F1Q13607 317 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 RAB32Q13637 225 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 SLC35E4Q6ICL7 350 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 ACOT7LQ6ZUV0 252 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 LYZL2Q7Z4W2 148 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 FOXRED2Q8IWF2 684 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 LGI3Q8N145 548 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 KCNRGQ8N5I3 272 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 INO80EQ8NBZ0 244 aaPredicted RBP12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 ST6GALNAC3Q8NDV1 305 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 GLYATL2Q8WU03 294 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 DNTTIP1Q9H147 329 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 MBNL3Q9NUK0 354 aaKnown RBP12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 OR5AC2Q9NZP5 309 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 ERRFI1Q9UJM3 462 aaPredicted RBP12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 UBE2J1Q9Y385 318 aaPredicted RBP12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 MAB21L2Q9Y586 359 aa12.21□□□□□ -0.45
PKNOX1-206ENST00000480179 TEX15Q9BXT5 2789 aa12.21□□□□□ -0.46
PKNOX1-206ENST00000480179 KANTRA0A1W2PQU2 76 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 NPIPB11E5RHQ5 1161 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 IFNL4K9M1U5 179 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 CCL21O00585 134 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 OR4A8P0C604 315 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 PSG2P11465 335 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 SNTB1Q13884 538 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 EDDM3AQ14507 147 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 ZNF345Q14585 488 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 KRBOX4Q5JUW0 171 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 HIST2H2BCQ6DN03 193 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 GCSAMQ8N6F7 178 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 TPRX1Q8N7U7 411 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 OR1L1Q8NH94 360 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 LHFPL5Q8TAF8 219 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 MSI2Q96DH6 328 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 C18orf12Q96KH6 178 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 RNF126Q9BV68 326 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 KCNS2Q9ULS6 477 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 UTP20O75691 2785 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 IGKV1D-17A0A075B6S4 117 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 MEX3AA1L020 520 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 A1L4Q6 167 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 C12orf77C9JDV5 145 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 BCL2L11O43521 198 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 SPDEFO95238 335 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 SCGB1D2O95969 90 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 TNFSF4P23510 183 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 GLIPR1P48060 266 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 TESK1Q15569 626 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 ADIPOQQ15848 244 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 TMEM268Q5VZI3 342 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 PRSS54Q6PEW0 395 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 SSX8Q7RTT4 187 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 CMTM1Q8IZ96 169 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 LRTM2Q8N967 370 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 OR10V1Q8NGI7 309 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 MRGPRDQ8TDS7 321 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 PARP12Q9H0J9 701 aaKnown RBP12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 TMEM222Q9H0R3 208 aa12.2□□□□□ -0.46
PKNOX1-206ENST00000480179 KIAA2026Q5HYC2 2103 aa12.19□□□□□ -0.46
PKNOX1-206ENST00000480179 LUMP51884 338 aaPredicted RBP12.19□□□□□ -0.46
PKNOX1-206ENST00000480179 SRPXP78539 464 aa12.19□□□□□ -0.46
PKNOX1-206ENST00000480179 IL15RAQ13261 267 aa12.19□□□□□ -0.46
PKNOX1-206ENST00000480179 FAM201AQ5SY85 155 aa12.19□□□□□ -0.46
PKNOX1-206ENST00000480179 FAM90A1Q86YD7 464 aa12.19□□□□□ -0.46
PKNOX1-206ENST00000480179 SLC35G3Q8N808 338 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms