RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 Q3ZCU0 254 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 OLFML2AQ68BL7 652 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 BAIAP2L2Q6UXY1 529 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 RBMS3Q6XE24 437 aaKnown RBP16.05■□□□□ 0.16
LIME1-205ENST00000480139 Q6ZPA2 131 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 ABHD12Q8N2K0 398 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 SIGLECL1Q8N7X8 197 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 BEND2Q8NDZ0 799 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 RFESDQ8TAC1 157 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 PHF21AQ96BD5 680 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 JMJD8Q96S16 334 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 TAF9BQ9HBM6 251 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 ZNF286AQ9HBT8 521 aa16.05■□□□□ 0.16
LIME1-205ENST00000480139 A0A1W2PRD5 423 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 A0A1W2PRF3 423 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 A0A1W2PRM7 423 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 IGLV1-47P01700 117 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 HBZP02008 142 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 ARG1P05089 322 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 FBP1P09467 338 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 NFYBP25208 207 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 LGALS4P56470 323 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 LOXL3P58215 753 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 MRPS15P82914 257 aaKnown RBP16.04■□□□□ 0.16
LIME1-205ENST00000480139 HTD2P86397 168 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 CDNFQ49AH0 187 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 MINOS1Q5TGZ0 78 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 LDLRAD3Q86YD5 345 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 SAMD12Q8N8I0 201 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 OR9G1Q8NH87 305 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 ZNF596Q8TC21 504 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 AJUBAQ96IF1 538 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 HDHD3Q9BSH5 251 aaPredicted RBP16.04■□□□□ 0.16
LIME1-205ENST00000480139 RBM38Q9H0Z9 239 aaKnown RBP16.04■□□□□ 0.16
LIME1-205ENST00000480139 DIABLOQ9NR28 239 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 FAM96BQ9Y3D0 163 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 MINOS1-NBL1R4GNA1 71 aa16.04■□□□□ 0.16
LIME1-205ENST00000480139 ZNF701M0R085 212 aaPredicted RBP16.03■□□□□ 0.16
LIME1-205ENST00000480139 SDCBPO00560 298 aaPredicted RBP16.03■□□□□ 0.16
LIME1-205ENST00000480139 SOX6P35712 828 aa16.03■□□□□ 0.16
LIME1-205ENST00000480139 PNLIPRP3Q17RR3 467 aa16.03■□□□□ 0.16
LIME1-205ENST00000480139 ZNF260Q3ZCT1 412 aa16.03■□□□□ 0.16
LIME1-205ENST00000480139 HACD4Q5VWC8 232 aa16.03■□□□□ 0.16
LIME1-205ENST00000480139 MZT2AQ6P582 158 aa16.03■□□□□ 0.16
LIME1-205ENST00000480139 Q6YL49 198 aa16.03■□□□□ 0.16
LIME1-205ENST00000480139 C8orf31Q8N9H6 132 aa16.03■□□□□ 0.16
LIME1-205ENST00000480139 DYNC2LI1Q8TCX1 351 aa16.03■□□□□ 0.16
LIME1-205ENST00000480139 S100A16Q96FQ6 103 aaKnown RBP16.03■□□□□ 0.16
LIME1-205ENST00000480139 ZMAT3Q9HA38 289 aaKnown RBP16.03■□□□□ 0.16
LIME1-205ENST00000480139 Q9N2K0 584 aa16.03■□□□□ 0.16
LIME1-205ENST00000480139 GFOD1Q9NXC2 390 aa16.03■□□□□ 0.16
LIME1-205ENST00000480139 CCDC59Q9P031 241 aaKnown RBP16.03■□□□□ 0.16
LIME1-205ENST00000480139 A0A075B6Q4 140 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 MDFIC2A0A1B0GVS7 189 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 APOA1P02647 267 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 FCGR3AP08637 254 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 PRRX1P54821 245 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 PITPNAQ00169 270 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 SRSF7Q16629 238 aaKnown RBP eCLIP16.02■□□□□ 0.16
LIME1-205ENST00000480139 OR4P4Q8NGL7 312 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 OR1L1Q8NH94 360 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 ZDHHC16Q969W1 377 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 CREB3L1Q96BA8 519 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 MALSU1Q96EH3 234 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 ZNRD1Q9P1U0 126 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 COMMD3Q9UBI1 195 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 JPT1Q9UK76 154 aa16.02■□□□□ 0.16
LIME1-205ENST00000480139 FAM172BPA6NC97 362 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 CLDN34H7C241 214 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 J3QR06 171 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 TOR1AO14656 332 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 XRCC3O43542 346 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 MELTFP08582 738 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 DTYMKP23919 212 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 HTR1DP28221 377 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 HLA-DRB3P79483 266 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 ARFRP1Q13795 201 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 LTC4SQ16873 150 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 HLA-DRB5Q30154 266 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 UTF1Q5T230 341 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 STEAP3Q658P3 488 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 Q6ZS49 121 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 PRR18Q8N4B5 295 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 TMEM86BQ8N661 226 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 UBALD1Q8TB05 177 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 SETD6Q8TBK2 473 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 GALMQ96C23 342 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 MEGF9Q9H1U4 602 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 MMP28Q9H239 520 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 PSG11Q9UQ72 335 aa16.01■□□□□ 0.15
LIME1-205ENST00000480139 TRAV18A0A075B6X5 111 aa16■□□□□ 0.15
LIME1-205ENST00000480139 TMEM235A6NFC5 223 aa16■□□□□ 0.15
LIME1-205ENST00000480139 TALDO1P37837 337 aa16■□□□□ 0.15
LIME1-205ENST00000480139 BAMBIQ13145 260 aa16■□□□□ 0.15
LIME1-205ENST00000480139 AANATQ16613 207 aa16■□□□□ 0.15
LIME1-205ENST00000480139 LY6G6FQ5SQ64 297 aa16■□□□□ 0.15
LIME1-205ENST00000480139 LHFPL4Q7Z7J7 247 aa16■□□□□ 0.15
LIME1-205ENST00000480139 LINC00311Q8N616 119 aa16■□□□□ 0.15
LIME1-205ENST00000480139 ZDHHC22Q8N966 263 aa16■□□□□ 0.15
LIME1-205ENST00000480139 SSMEM1Q8WWF3 244 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms