RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 OR6C3Q9NZP0 311 aa9.21□□□□□ -0.94
VTI1A-204ENST00000480057 PAIP2BQ9ULR5 123 aaKnown RBP9.21□□□□□ -0.94
VTI1A-204ENST00000480057 TRAV38-1A0A0B4J264 116 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 ODAMA1E959 279 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 C5orf51A6NDU8 294 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 NKX6-3A6NJ46 265 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 C12orf77C9JDV5 145 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 SIGLEC5O15389 551 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 SPINT2O43291 252 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 IFNA21P01568 189 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 RPA2P15927 270 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 GNLYP22749 145 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 GRNP28799 593 aaKnown RBP9.2□□□□□ -0.94
VTI1A-204ENST00000480057 IL2RGP31785 369 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 CD80P33681 288 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 PPOXP50336 477 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 SNRPD2P62316 118 aaKnown RBP9.2□□□□□ -0.94
VTI1A-204ENST00000480057 CDSNQ15517 529 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 PHLDA2Q53GA4 152 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 ESCO2Q56NI9 601 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 Q5BKY6 102 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 ZNF788Q6ZQV5 615 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 BOLLQ8N9W6 283 aaKnown RBP9.2□□□□□ -0.94
VTI1A-204ENST00000480057 SECTM1Q8WVN6 248 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 ITLN2Q8WWU7 325 aaPredicted RBP9.2□□□□□ -0.94
VTI1A-204ENST00000480057 IL22RA2Q969J5 263 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 C2orf50Q96LR7 162 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 TMEM106BQ9NUM4 274 aa9.2□□□□□ -0.94
VTI1A-204ENST00000480057 HCFC1P51610 2035 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 PPIAL4EA0A075B759 164 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 IGHV3OR15-7A0A075B7D8 119 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 TRAV14DV4A0A0A6YYC5 116 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 IGKV1D-13A0A0B4J2D9 117 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 C3orf85A0A1B0GTC6 90 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 PPIAL4DF5H284 164 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 H0Y980 276 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 C15orf65H3BRN8 121 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 TMEM178BH3BS89 294 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 CCSO14618 274 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 SIAH2O43255 324 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 HSPA12AO43301 675 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 NDUFA2O43678 99 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 ZNF205O95201 554 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 GOSR1O95249 250 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 CYB5R3P00387 301 aaPredicted RBP9.19□□□□□ -0.94
VTI1A-204ENST00000480057 HBZP02008 142 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 OR5AC1P0C628 307 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 PET100P0DJ07 73 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 PPIAL4FP0DN26 164 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 IGKV1-13P0DP09 117 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 GLIPR1P48060 266 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 CCL8P80075 99 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 IL15RAQ13261 267 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 LGALSLQ3ZCW2 172 aaPredicted RBP9.19□□□□□ -0.94
VTI1A-204ENST00000480057 C11orf87Q6NUJ2 197 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 ZNF818PQ6ZRF7 136 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 TBC1D26Q86UD7 250 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 MUC15Q8N387 334 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 GRPEL2Q8TAA5 225 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 GLYATL2Q8WU03 294 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 PPP1R1CQ8WVI7 109 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 IL1F10Q8WWZ1 152 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 MSI2Q96DH6 328 aaKnown RBP9.19□□□□□ -0.94
VTI1A-204ENST00000480057 C14orf79Q96F83 325 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 C18orf12Q96KH6 178 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 TMEM56Q96MV1 263 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 GAFA1Q96PS6 74 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 TMEM222Q9H0R3 208 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 METTL8Q9H825 291 aaKnown RBP9.19□□□□□ -0.94
VTI1A-204ENST00000480057 CCL28Q9NRJ3 127 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 PLSCR3Q9NRY6 295 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 ZFP57Q9NU63 452 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 RDH8Q9NYR8 311 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 OR1A1Q9P1Q5 309 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 JPT1Q9UK76 154 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 TMED3Q9Y3Q3 217 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 PPIAL4AQ9Y536 164 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 MAB21L2Q9Y586 359 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 TMEM56-RWDD3S4R434 201 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 CHD8Q9HCK8 2581 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 TANC2Q9HCD6 1990 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 PCNX1Q96RV3 2341 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 PLCE1Q9P212 2302 aa9.19□□□□□ -0.94
VTI1A-204ENST00000480057 C13orf42A0A1B0GVH6 325 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 RNF212BA8MTL3 300 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 FAM25EA8MYX2 175 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 F2RL2O00254 374 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 ITGB1BP1O14713 200 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 PHF1O43189 567 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-204ENST00000480057 PGLYRP1O75594 196 aaPredicted RBP9.18□□□□□ -0.94
VTI1A-204ENST00000480057 ADAP1O75689 374 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 PLAUP00749 431 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 LYL1P12980 280 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 UCP1P25874 307 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 PSMB6P28072 239 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 CEACAM6P40199 344 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 ZNF345Q14585 488 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 ZNF767PQ75MW2 155 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 OR13A1Q8NGR1 328 aa9.18□□□□□ -0.94
VTI1A-204ENST00000480057 OR1L1Q8NH94 360 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms