RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 CCL28Q9NRJ3 127 aa12.45□□□□□ -0.42
COL20A1-206ENST00000479501 TRGV8A0A0C4DH27 118 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 OR5H1A6NKK0 313 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 TMEM14DPA8MWL7 114 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 SPINK4O60575 86 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 FCGR3AP08637 254 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 CD82P27701 267 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 RTL8BQ17RB0 113 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 NHLRC3Q5JS37 347 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 NSUN5P2Q63ZY6 315 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 MDP1Q86V88 176 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 OR10AD1Q8NGE0 317 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 TLNRD1Q9H1K6 362 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 CXXC4Q9H2H0 198 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 PSG11Q9UQ72 335 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 DEFB108AA8MXU0 73 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 KCNAB3O43448 404 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 CT45A10P0DMU9 189 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 SUB1P53999 127 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL20A1-206ENST00000479501 FAM78BQ5VT40 261 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 C17orf82Q86X59 251 aaPredicted RBP12.44□□□□□ -0.42
COL20A1-206ENST00000479501 MRGPRDQ8TDS7 321 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 SLC25A22Q9H936 323 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 Q9N2K0 584 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 CACNA1HO95180 2353 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 K7ESF4 209 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 SOX15O60248 233 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 TNFRSF1AP19438 455 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 C10orf128Q5T292 105 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 MRPL14Q6P1L8 145 aaKnown RBP12.44□□□□□ -0.42
COL20A1-206ENST00000479501 OR10X1Q8NGY0 326 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 GMPPAQ96IJ6 420 aaPredicted RBP12.44□□□□□ -0.42
COL20A1-206ENST00000479501 MSL2Q9HCI7 577 aa12.44□□□□□ -0.42
COL20A1-206ENST00000479501 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.44□□□□□ -0.42
COL20A1-206ENST00000479501 LOC101059948A0A1B0GTJ6 334 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 PRR32B1ATL7 298 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 B4DEV8 164 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 RPL36A-HNRNPH2H7BZ11 118 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 CCKARP32238 428 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 P2RY1P47900 373 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 H2BFSP57053 126 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 CACNA1GO43497 2377 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 SLC31A2O15432 143 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 SEC11BP0C7V7 166 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 MST1P26927 711 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 AMTP48728 403 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 FOXC1Q12948 553 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 IL24Q13007 206 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 SLC25A40Q8TBP6 338 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 WNT2BQ93097 391 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 SIRT7Q9NRC8 400 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 PRSS50Q9UI38 385 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 PITPNC1Q9UKF7 332 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 FOXO1Q12778 655 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 CDCP2Q5VXM1 449 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 FAM122AQ96E09 287 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 CHRDL1Q9BU40 450 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 COMMD5Q9GZQ3 224 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 OR2D2Q9H210 308 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 LOC102723971A0A1B0GUV8 181 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 KLF3P57682 345 aaPredicted RBP12.43□□□□□ -0.42
COL20A1-206ENST00000479501 IMMP1LQ96LU5 166 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 CACFD1Q9UGQ2 172 aa12.43□□□□□ -0.42
COL20A1-206ENST00000479501 ACACAQ13085 2346 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 TRAV39A0A0B4J263 110 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 DHRS7CA6NNS2 312 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 CDS2O95674 445 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 INO80CQ6PI98 192 aaPredicted RBP12.42□□□□□ -0.42
COL20A1-206ENST00000479501 NEIL1Q96FI4 390 aaPredicted RBP12.42□□□□□ -0.42
COL20A1-206ENST00000479501 MESP1Q9BRJ9 268 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 HES7Q9BYE0 225 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 OR2J1Q9GZK6 312 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 NAT8Q9UHE5 227 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 IL17BQ9UHF5 180 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 HOXD4P09016 255 aaPredicted RBP12.42□□□□□ -0.42
COL20A1-206ENST00000479501 ACAA1P09110 424 aaPredicted RBP12.42□□□□□ -0.42
COL20A1-206ENST00000479501 TGIF1Q15583 401 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 IGFBP7Q16270 282 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 ZNF880Q6PDB4 577 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 NOL4LQ96MY1 436 aaPredicted RBP12.42□□□□□ -0.42
COL20A1-206ENST00000479501 A0A087WV48 116 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 IGHV3-43A0A0B4J1X8 118 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 ZNHIT1O43257 154 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 GALR2O43603 387 aaPredicted RBP12.42□□□□□ -0.42
COL20A1-206ENST00000479501 SP9P0CG40 484 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 IGHV3-43DP0DP04 118 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 TMEM11P17152 192 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 S100A7P31151 101 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 DYNLT3P51808 116 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 CD81P60033 236 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 CEACAM21Q3KPI0 293 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 LDLRAD3Q86YD5 345 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 FKBP11Q9NYL4 201 aa12.42□□□□□ -0.42
COL20A1-206ENST00000479501 CD74P04233 296 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 RCC1P18754 421 aaPredicted RBP12.41□□□□□ -0.42
COL20A1-206ENST00000479501 USF1P22415 310 aaPredicted RBP12.41□□□□□ -0.42
COL20A1-206ENST00000479501 ZNF441Q8N8Z8 693 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 MS4A3Q96HJ5 214 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 ZNF488Q96MN9 340 aa12.41□□□□□ -0.42
COL20A1-206ENST00000479501 OR51M1Q9H341 326 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms