RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 ARL4DP49703 201 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 CARD18P57730 90 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 MORN2Q502X0 79 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 SMIM7Q9BQ49 75 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 MRPS2Q9Y399 296 aaKnown RBP11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 A0A0U1RQV5 110 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 NKX2-8O15522 239 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 FOXS1O43638 330 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 NDUFB8O95169 186 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 TIAF1O95411 115 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 IGHMP01871 453 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 SLC35E2P0CK97 266 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 PLA2G2AP14555 144 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 WNT5AP41221 380 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 SLC25A24Q6NUK1 477 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 TMEM252Q8N6L7 170 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 ZNF738Q8NE65 137 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 OR56B2PQ8NGI1 322 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 OR5C1Q8NGR4 320 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 OR2V1Q8NHB1 315 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 CMTM2Q8TAZ6 248 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 TMEM171Q8WVE6 324 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 RTN4IP1Q8WWV3 396 aaPredicted RBP11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 ZNF552Q9H707 407 aaPredicted RBP11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 MOB1AQ9H8S9 216 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 FGF21Q9NSA1 209 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 STARD5Q9NSY2 213 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 FAM206AQ9NX38 181 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 HSPB7Q9UBY9 170 aa11.35□□□□□ -0.59
CNKSR3-204ENST00000479339 ZFP92A6NM28 416 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 DDAH2O95865 285 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 TTRP02766 147 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 ZNF728P0DKX0 622 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 ESDP10768 282 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 MPV17LQ2QL34 196 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 DNM1P34Q6PK57 102 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 KLHL24Q6TFL4 600 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 CBLN3Q6UW01 205 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 ZNF501Q96CX3 271 aaPredicted RBP11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 MSI2Q96DH6 328 aaKnown RBP11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 VSTM2LQ96N03 204 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 ATP5SQ99766 215 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 PECRQ9BY49 303 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 WIPI2Q9Y4P8 454 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 ATRXP46100 2492 aa11.34□□□□□ -0.59
CNKSR3-204ENST00000479339 F6UZH7 168 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 MT-ATP6P00846 226 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 FAM87AP0C7U9 286 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 CTLA4P16410 223 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 NKX2-1P43699 371 aaPredicted RBP11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 SGCBQ16585 318 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 LYG1Q8N1E2 194 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 CCDC71LQ8N9Z2 235 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 NECAP1Q8NC96 275 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 OR4N2Q8NGD1 307 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 OR51T1Q8NGJ9 327 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 TXNIPQ9H3M7 391 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 BANF2Q9H503 90 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 UQCR10Q9UDW1 63 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 PAM16Q9Y3D7 125 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 PTRH2Q9Y3E5 179 aaKnown RBP11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 IGHV2-70DA0A0C4DH43 119 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 TMEM250H0YL14 139 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 CYR61O00622 381 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 ASCL1P50553 236 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 RPL23P62829 140 aaKnown RBP11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 ACKR1Q16570 336 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 RNF151Q2KHN1 245 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 OR1L6Q8NGR2 347 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 CT55Q8WUE5 264 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 RNF133Q8WVZ7 376 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 FOXN4Q96NZ1 517 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 ZNF701Q9NV72 531 aaPredicted RBP11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 SOHLH2Q9NX45 425 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 RFNGQ9Y644 331 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 COX11Q9Y6N1 276 aa11.33□□□□□ -0.6
CNKSR3-204ENST00000479339 TRAV36DV7A0A075B6V5 113 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 LOC105371242A0A075B767 164 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 OR6C6A6NF89 314 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 C21orf140B9A014 251 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 BMP5P22003 454 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 OR3A4PP47883 348 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 DYNLT3P51808 116 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 RPL15P61313 204 aaKnown RBP11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 MAJINQ3KP22 176 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 TMEM41BQ5BJD5 291 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 OR5AS1Q8N127 324 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 C17orf78Q8N4C9 275 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 VPS25Q9BRG1 176 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 REPIN1Q9BWE0 567 aaKnown RBP11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 TM2D1Q9BX74 207 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 PARD6GQ9BYG4 376 aaPredicted RBP11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 PBOV1Q9GZY1 135 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 NECAP2Q9NVZ3 263 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 ZNF319Q9P2F9 582 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 ANXA10Q9UJ72 324 aa11.32□□□□□ -0.6
CNKSR3-204ENST00000479339 DUXBA0A1W2PPF3 345 aa11.31□□□□□ -0.6
CNKSR3-204ENST00000479339 MSTNO14793 375 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms