RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 MMDQ15546 238 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 FDX2Q6P4F2 183 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 KCTD20Q7Z5Y7 419 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 SUMF2Q8NBJ7 301 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 PXT1Q8NFP0 134 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 OR5D14Q8NGL3 314 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 IL17DQ8TAD2 202 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 DPCDQ9BVM2 203 aaPredicted RBP13.23□□□□□ -0.29
VIM-204ENST00000478746 PARP11Q9NR21 331 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 MRPS28Q9Y2Q9 187 aaKnown RBP13.23□□□□□ -0.29
VIM-204ENST00000478746 TNCP24821 2201 aa13.23□□□□□ -0.29
VIM-204ENST00000478746 IGHV4OR15-8A0A075B7B6 117 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 A0A087WW49 117 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 G3V2T6 193 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 HSPA12AO43301 675 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 HTR1AP08908 422 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 VHLP40337 213 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 CCR9P51686 369 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 TMED1Q13445 227 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 HAGHQ16775 308 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 PIGYQ3MUY2 71 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 KDM4DQ6B0I6 523 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 ZFP1Q6P2D0 407 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 SLC25A48Q6ZT89 311 aaKnown RBP13.22□□□□□ -0.29
VIM-204ENST00000478746 MINDY2Q8NBR6 621 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 PYDC1Q8WXC3 89 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 TPSG1Q9NRR2 321 aa13.22□□□□□ -0.29
VIM-204ENST00000478746 TMEM30CPA0ZSE6 113 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 SLC31A2O15432 143 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 SULT1B1O43704 296 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 ORC5O43913 435 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 LGALS1P09382 135 aaKnown RBP13.21□□□□□ -0.29
VIM-204ENST00000478746 FCGR1AP12314 374 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 ARSBP15848 533 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 RSU1Q15404 277 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 Q3ZCU0 254 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 HAPLN4Q86UW8 402 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 SERPINA12Q8IW75 414 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 OR10K1Q8NGX5 313 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 CCDC107Q8WV48 283 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 RFKQ969G6 155 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 ELOVL1Q9BW60 279 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 ERGIC3Q9Y282 383 aa13.21□□□□□ -0.29
VIM-204ENST00000478746 IGHV7-81A0A0B4J1V7 117 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 HTR3BO95264 441 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 HLA-DRB1P01911 266 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 HSPB1P04792 205 aaKnown RBP13.2□□□□□ -0.3
VIM-204ENST00000478746 FASP25445 335 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 ZNF137PP52743 207 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 SATL1Q86VE3 508 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 ANKRD13BQ86YJ7 626 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 ZDHHC13Q8IUH4 622 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 OR8J1Q8NGP2 316 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 TNFAIP8L1Q8WVP5 186 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 FLYWCH2Q96CP2 140 aaKnown RBP13.2□□□□□ -0.3
VIM-204ENST00000478746 GPER1Q99527 375 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 ANKRD60Q9BZ19 345 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 ZNF581Q9P0T4 197 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 STUB1Q9UNE7 303 aa13.2□□□□□ -0.3
VIM-204ENST00000478746 OR4C45A6NMZ5 311 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 OR7C1O76099 320 aaPredicted RBP13.19□□□□□ -0.3
VIM-204ENST00000478746 IGLV1-51P01701 117 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 BLVRBP30043 206 aaPredicted RBP13.19□□□□□ -0.3
VIM-204ENST00000478746 ZNF134P52741 427 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 ACTBP60709 375 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 LSAMPQ13449 338 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 ATP6AP1Q15904 470 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 CT45A1Q5HYN5 189 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 LPCAT4Q643R3 524 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 LIN54Q6MZP7 749 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 CT45A3Q8NHU0 189 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 CPNE2Q96FN4 548 aaPredicted RBP13.19□□□□□ -0.3
VIM-204ENST00000478746 CIB1Q99828 191 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 ZNF251Q9BRH9 671 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 RSRP1Q9BUV0 290 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 GABARAPL1Q9H0R8 117 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 TUBA4BQ9H853 241 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 S100A14Q9HCY8 104 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 ST3GAL6Q9Y274 331 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 ALMS1Q8TCU4 4167 aa13.19□□□□□ -0.3
VIM-204ENST00000478746 A0A1W2PN81 502 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 DAPL1A0PJW8 107 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 SLC16A6O15403 523 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 MAGEB3O15480 346 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 CNTFRP26992 372 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 CHRNA7P36544 502 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 POLR2IP36954 125 aaKnown RBP13.18□□□□□ -0.3
VIM-204ENST00000478746 ALKBH1Q13686 389 aaKnown RBP13.18□□□□□ -0.3
VIM-204ENST00000478746 PARP16Q8N5Y8 322 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 ZNF439Q8NDP4 499 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 CASTOR1Q8WTX7 329 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 RITA1Q96K30 269 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 FAM192AQ9GZU8 254 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 IFT22Q9H7X7 185 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 GNG12Q9UBI6 72 aa13.18□□□□□ -0.3
VIM-204ENST00000478746 H3BNX3 289 aa13.17□□□□□ -0.3
VIM-204ENST00000478746 J3QLW9 94 aa13.17□□□□□ -0.3
VIM-204ENST00000478746 GABRPO00591 440 aa13.17□□□□□ -0.3
VIM-204ENST00000478746 ARPC1BO15143 372 aaKnown RBP13.17□□□□□ -0.3
VIM-204ENST00000478746 LANCL1O43813 399 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms