RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 VAMP8Q9BV40 100 aa8.45□□□□□ -1.06
COL13A1-207ENST00000478219 SLC7A10Q9NS82 523 aa8.45□□□□□ -1.06
COL13A1-207ENST00000478219 KLHL13Q9P2N7 655 aa8.45□□□□□ -1.06
COL13A1-207ENST00000478219 TMEM56-RWDD3S4R434 201 aa8.45□□□□□ -1.06
COL13A1-207ENST00000478219 EYSQ5T1H1 3165 aa8.45□□□□□ -1.06
COL13A1-207ENST00000478219 PCDH15Q96QU1 1955 aa8.45□□□□□ -1.06
COL13A1-207ENST00000478219 VSTM5A8MXK1 200 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 IGKV3-11P04433 115 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 NPPCP23582 126 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 DLX2Q07687 328 aaPredicted RBP8.44□□□□□ -1.06
COL13A1-207ENST00000478219 PLCXD2Q0VAA5 305 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 ZP4Q12836 540 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 CMTM2Q8TAZ6 248 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 SLC37A2Q8TED4 501 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 FAM131CQ96AQ9 280 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 SLC46A1Q96NT5 459 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 PXMP4Q9Y6I8 212 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 IGKV1D-13A0A0B4J2D9 117 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 IGKV1-12A0A0C4DH73 117 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 PGPEP1LA6NFU8 196 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 M0QZ24 198 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 TNFRSF10CO14798 259 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 EFNA2O43921 213 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 IFNA5P01569 189 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 IGKV1D-12P01611 117 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 IGHG1P01857 330 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 WNT2P09544 360 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 OR5G3P0C626 314 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 IGKV1-13P0DP09 117 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 BMP5P22003 454 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 ZNF133P52736 654 aaPredicted RBP8.44□□□□□ -1.06
COL13A1-207ENST00000478219 HERV-K104P61576 105 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 RSPO1Q2MKA7 263 aaPredicted RBP8.44□□□□□ -1.06
COL13A1-207ENST00000478219 GAPTQ8N292 157 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 LHX4Q969G2 390 aa8.44□□□□□ -1.06
COL13A1-207ENST00000478219 COL6A3P12111 3177 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 SERF1AO75920 110 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 IGLV3-1P01715 115 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 HNRNPA1P09651 372 aaKnown RBP eCLIP8.43□□□□□ -1.06
COL13A1-207ENST00000478219 IAPPP10997 89 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 DTYMKP23919 212 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 MNX1P50219 401 aaPredicted RBP8.43□□□□□ -1.06
COL13A1-207ENST00000478219 CLRN1P58418 232 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 RPS18P62269 152 aaKnown RBP8.43□□□□□ -1.06
COL13A1-207ENST00000478219 TMEM183BQ1AE95 376 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 TMEM41BQ5BJD5 291 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 UNQ5815/PRO19632Q6UWF5 114 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 Q6ZRM9 215 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 CCDC71LQ8N9Z2 235 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 OR4F5Q8NH21 305 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 WDYHV1Q96HA8 205 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 OR4F4Q96R69 305 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 UBE2ZQ9H832 354 aaPredicted RBP8.43□□□□□ -1.06
COL13A1-207ENST00000478219 PATZ1Q9HBE1 687 aaKnown RBP8.43□□□□□ -1.06
COL13A1-207ENST00000478219 TMEM9BQ9NQ34 198 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 ESPL1Q14674 2120 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 TRAV34A0A0B4J273 112 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 KIAA1324LA8MWY0 1029 aaPredicted RBP8.43□□□□□ -1.06
COL13A1-207ENST00000478219 PDGFBP01127 241 aaPredicted RBP8.43□□□□□ -1.06
COL13A1-207ENST00000478219 FRMD6-AS1P0C7T7 363 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 HNF1AP20823 631 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 PRDX4Q13162 271 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 DAZAP2Q15038 168 aaPredicted RBP8.43□□□□□ -1.06
COL13A1-207ENST00000478219 ZNF525Q8N782 197 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 ZNF709Q8N972 641 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 Q8N976 141 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 OR2AE1Q8NHA4 323 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 FGF14Q92915 247 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 ZNF501Q96CX3 271 aaPredicted RBP8.43□□□□□ -1.06
COL13A1-207ENST00000478219 CCDC74BQ96LY2 380 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 SLC25A22Q9H936 323 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 GTF3C1Q12789 2109 aa8.43□□□□□ -1.06
COL13A1-207ENST00000478219 SH2D1BO14796 132 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 DHRS3O75911 302 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 ADH1BP00325 375 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 IGHEP01854 428 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 MYBPHQ13203 477 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 SNAI3Q3KNW1 292 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 TMEM144Q7Z5S9 345 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 SAXO1Q8IYX7 474 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 MRPL43Q8N983 215 aaKnown RBP8.42□□□□□ -1.06
COL13A1-207ENST00000478219 ZNF114Q8NC26 417 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 AGBL5Q8NDL9 886 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 OR1K1Q8NGR3 316 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 DEFB118Q96PH6 123 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 RNF208Q9H0X6 261 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 FBXL7Q9UJT9 491 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 CLEC18AA5D8T8 446 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 C1QTNF9P0C862 333 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 CCL5P13501 91 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 VDAC1P21796 283 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 SRP14P37108 136 aaKnown RBP8.42□□□□□ -1.06
COL13A1-207ENST00000478219 VHLLQ6RSH7 139 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 ERASQ7Z444 233 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.42□□□□□ -1.06
COL13A1-207ENST00000478219 CLEC18CQ8NCF0 446 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 SCGB1C1Q8TD33 95 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 ANAPC16Q96DE5 110 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 SPIN2AQ99865 258 aa8.42□□□□□ -1.06
COL13A1-207ENST00000478219 SPIN2BQ9BPZ2 258 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms