RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 C12orf4Q9NQ89 552 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 NIT2Q9NQR4 276 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 ZC4H2Q9NQZ6 224 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 ANXA10Q9UJ72 324 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 MYO15BQ96JP2 1530 aa-0.61□□□□□ -2.51
NCKAP1-204ENST00000477988 EIF4G1Q04637 1599 aaKnown RBP-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 WNK2Q9Y3S1 2297 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 ABCA12Q86UK0 2595 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 A0A1W2PPM0 123 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 SNAI1O95863 264 aaPredicted RBP-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 FGF4P08620 206 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 PPP1CCP36873 323 aaKnown RBP-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 CLDN6P56747 220 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 GUSBP1Q15486 140 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 C10orf55Q5SWW7 151 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 TMEM220Q6QAJ8 160 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 RASL11AQ6T310 242 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 CENPQQ7L2Z9 268 aaPredicted RBP-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 SLC35E3Q7Z769 313 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 SCD5Q86SK9 330 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 CYP4Z1Q86W10 505 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 NELFCDQ8IXH7 590 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 OR5J2Q8NH18 312 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 MBD3L1Q8WWY6 194 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 ISOC2Q96AB3 205 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 OBSCN-AS1Q96MR7 158 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 NAP1L5Q96NT1 182 aaPredicted RBP-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 TBX5Q99593 518 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 MRPL57Q9BQC6 102 aaKnown RBP-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 REG4Q9BYZ8 158 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 TMEM185BQ9H7F4 350 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 BLOC1S6Q9UL45 172 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 POMPQ9Y244 141 aa-0.62□□□□□ -2.51
NCKAP1-204ENST00000477988 MCM3APO60318 1980 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 PDZD2O15018 2839 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 A0A1W2PRD5 423 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 TRAPPC13A5PLN9 417 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 GOLGA8OA6NCC3 632 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 GOLGA8NF8WBI6 632 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 UBFD1O14562 309 aaKnown RBP-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 WBP4O75554 376 aaKnown RBP-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 MYO1DO94832 1006 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 ATP5IP56385 69 aaPredicted RBP-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 Q1T7F1 81 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 LGALS9BQ3B8N2 356 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 HSP90B2PQ58FF3 399 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 SYT6Q5T7P8 510 aaPredicted RBP-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 SPINK6Q6UWN8 80 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 C1orf158Q8N1D5 194 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 GATD1Q8NB37 220 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 C9orf72Q96LT7 481 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 CRACR2AQ9BSW2 395 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 ANP32EQ9BTT0 268 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 GEMIN7Q9H840 131 aaKnown RBP-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 GCNT4Q9P109 453 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 GLS2Q9UI32 602 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 SNURFQ9Y675 71 aa-0.63□□□□□ -2.51
NCKAP1-204ENST00000477988 NRCAMQ92823 1304 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 MED12LQ86YW9 2145 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 H0Y8G0 127 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 J3QLI3 93 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 DENRO43583 198 aaKnown RBP-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 CA2P00918 260 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 GSTM3P21266 225 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 RPL27AP46776 148 aaKnown RBP-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 SULT1E1P49888 294 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 SPINK7P58062 85 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 TOMM34Q15785 309 aaPredicted RBP-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 MOGQ16653 247 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 MAJINQ3KP22 176 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 MRPL51Q4U2R6 128 aaKnown RBP-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 PABPC1L2AQ5JQF8 200 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 HES3Q5TGS1 186 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 TEX36Q5VZQ5 186 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 C7orf65Q6ZTY9 151 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 FAM19A3Q7Z5A8 133 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 LHFPL1Q86WI0 220 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 OR8D1Q8WZ84 308 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 TAMM41Q96BW9 452 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 RASD2Q96D21 266 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 CRLF2Q9HC73 371 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 FAM215AQ9Y5M1 114 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 CACNA1CQ13936 2221 aa-0.64□□□□□ -2.51
NCKAP1-204ENST00000477988 ASXL3Q9C0F0 2248 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 ADGRB2O60241 1585 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 SBNO1A3KN83 1393 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 INSRP06213 1382 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 TTC28Q96AY4 2481 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 IGHV2-26A0A0B4J1V2 119 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 A0A1B0GXF2 115 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 CTAGE15A4D2H0 777 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 PGPA6NDG6 321 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 TMEM235A6NFC5 223 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 OR5AL1P0C617 328 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 ZNF728P0DKX0 622 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 IGHV3-30-3P0DP02 117 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 ESDP10768 282 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 GTF2H1P32780 548 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 EVX1P49640 407 aa-0.65□□□□□ -2.51
NCKAP1-204ENST00000477988 IFFO1Q0D2I5 559 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms