RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 EIF2S3LQ2VIR3 472 aaKnown RBP10.33□□□□□ -0.76
PTPRF-212ENST00000477970 MBD3L2Q8NHZ7 208 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-212ENST00000477970 KLF14Q8TD94 323 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-212ENST00000477970 BCL2L14Q9BZR8 327 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 CXXC4Q9H2H0 198 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 SPTBN2O15020 2390 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 TRIM77I1YAP6 450 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 K7ENP7 123 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 H2AFB1P0C5Y9 115 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 ZNF44P15621 663 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 ZNF266Q14584 549 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 PURGQ9UJV8 347 aaKnown RBP10.33□□□□□ -0.76
PTPRF-212ENST00000477970 HSPB6O14558 160 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 HSD17B6O14756 317 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 HIPK2Q9H2X6 1198 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 OR51B6Q9H340 312 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 TAAR3PQ9P1P4 343 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 A0A1B0GW64 132 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 FAM157AC9JC47 383 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 ADAM20O43506 726 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 IGLV2-14P01704 120 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 DVL1P1P54792 670 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-212ENST00000477970 DEFA5Q01523 94 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 TESK1Q15569 626 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 GCNT2Q8N0V5 402 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 ZBTB34Q8NCN2 500 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 BSCL2Q96G97 398 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-212ENST00000477970 LUZP4Q9P127 313 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 MAP1BP46821 2468 aaKnown RBP10.32□□□□□ -0.76
PTPRF-212ENST00000477970 A0A1W2PR80 420 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 HEXAP06865 529 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 MZT1Q08AG7 82 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 SLC35E4Q6ICL7 350 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 Q6ZRG5 221 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 C11orf53Q8IXP5 236 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 FAM216AQ8WUB2 273 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 NARS2Q96I59 477 aaKnown RBP10.32□□□□□ -0.76
PTPRF-212ENST00000477970 RNF115Q9Y4L5 304 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 KLK10O43240 276 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 TNFSF13O75888 250 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 SNAPINO95295 136 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 MUC1P15941 1255 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-212ENST00000477970 MPV17P39210 176 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 ERVS71-1P61550 626 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 SRSF3P84103 164 aaKnown RBP10.32□□□□□ -0.76
PTPRF-212ENST00000477970 SWI5Q1ZZU3 235 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 VWA1Q6PCB0 445 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 HRH4Q9H3N8 390 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 ZNF71Q9NQZ8 489 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-212ENST00000477970 COQ3Q9NZJ6 369 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 CACFD1Q9UGQ2 172 aa10.32□□□□□ -0.76
PTPRF-212ENST00000477970 DNAJC13O75165 2243 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 RNASEK-C17orf49H0YIS7 233 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 IFNL4K9M1U5 179 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 MLNRO43193 412 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 NXPH2O95156 264 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 HAND1O96004 215 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 DHRS7BQ6IAN0 325 aaPredicted RBP10.31□□□□□ -0.76
PTPRF-212ENST00000477970 C5orf24Q7Z6I8 188 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 PUSL1Q8N0Z8 303 aaKnown RBP10.31□□□□□ -0.76
PTPRF-212ENST00000477970 ZADH2Q8N4Q0 377 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 ERRFI1Q9UJM3 462 aaPredicted RBP10.31□□□□□ -0.76
PTPRF-212ENST00000477970 IGSF23A1L1A6 192 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 F8W036 122 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 CDIPTO14735 213 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 SMIM3Q9BZL3 60 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 CEP295Q9C0D2 2601 aa10.31□□□□□ -0.76
PTPRF-212ENST00000477970 SHANK1Q9Y566 2161 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 TMEM30CPA0ZSE6 113 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 KIAA1324LA8MWY0 1029 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-212ENST00000477970 UMAD1C9J7I0 102 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 WDR1O75083 606 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 PTBP3O95758 552 aaKnown RBP10.3□□□□□ -0.76
PTPRF-212ENST00000477970 GLI4P10075 376 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 NHLH2Q02577 135 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 ALKBH6Q3KRA9 238 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 BEND4Q6ZU67 534 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 TMEM252Q8N6L7 170 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 CNEP1R1Q8N9A8 125 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.3□□□□□ -0.76
PTPRF-212ENST00000477970 STARD4Q96DR4 205 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 TREM1Q9NP99 234 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 LIN7CQ9NUP9 197 aaKnown RBP10.3□□□□□ -0.76
PTPRF-212ENST00000477970 PROCRQ9UNN8 238 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 ESPL1Q14674 2120 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 AHCTF1Q8WYP5 2266 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 ACACBO00763 2458 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 DOCK7Q96N67 2140 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 RNF212BA8MTL3 300 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 SIRPB1O00241 398 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 SNCAP37840 140 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 ODF3L1Q8IXM7 274 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 CLRN3Q8NCR9 226 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 LFNGQ8NES3 379 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 SMDT1Q9H4I9 107 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 OR1A1Q9P1Q5 309 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 TRAPPC2LQ9UL33 140 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 TSPAN4O14817 238 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 CECR9P0C854 216 aa10.3□□□□□ -0.76
PTPRF-212ENST00000477970 POLR2GP62487 172 aaKnown RBP eCLIP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms