RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 THUMPD1Q9NXG2 353 aaKnown RBP3.18□□□□□ -1.9
VPS50-214ENST00000477935 USE1Q9NZ43 259 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 PTTG3PQ9NZH4 202 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 ZNF229Q9UJW7 825 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 ZNF443Q9Y2A4 671 aaPredicted RBP3.18□□□□□ -1.9
VPS50-214ENST00000477935 NDUFAF1Q9Y375 327 aa3.18□□□□□ -1.9
VPS50-214ENST00000477935 HMCN2Q8NDA2 5059 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 SH2D1BO14796 132 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 AZIN1O14977 448 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 CNIH1O95406 144 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 SLC2A10O95528 541 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 KRT75O95678 551 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 RBP4P02753 201 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 FCER2P06734 321 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 SNRPCP09234 159 aaKnown RBP3.17□□□□□ -1.9
VPS50-214ENST00000477935 OR8U9P0C7N5 309 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 INAFM2P0DMQ5 153 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 PGAM2P15259 253 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 BGNP21810 368 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 ZBTB25P24278 435 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 COX7A1P24310 79 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 UCP1P25874 307 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 CLDN8P56748 225 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 RPL31P62899 125 aaKnown RBP3.17□□□□□ -1.9
VPS50-214ENST00000477935 RUNX1Q01196 453 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 ZNF616Q08AN1 781 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 KLF5Q13887 457 aaPredicted RBP3.17□□□□□ -1.9
VPS50-214ENST00000477935 DGUOKQ16854 277 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 MICAQ29983 383 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 DEFB136Q30KP8 78 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 CFAP157Q5JU67 520 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 STUMQ69YW2 141 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 ZNF826PQ6ZT77 177 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 PGAP1Q75T13 922 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 TSEN54Q7Z6J9 526 aaKnown RBP3.17□□□□□ -1.9
VPS50-214ENST00000477935 CLECL1Q8IZS7 167 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 CCNYL1Q8N7R7 359 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 SPC24Q8NBT2 197 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 OR1N2Q8NGR9 330 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 OR1F12Q8NHA8 337 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 TCP10LQ8TDR4 215 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 LRRC29Q8WV35 223 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 NAPGQ99747 312 aaPredicted RBP3.17□□□□□ -1.9
VPS50-214ENST00000477935 SLC35A5Q9BS91 424 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 ALG12Q9BV10 488 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 SLCO1B3Q9NPD5 702 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 P2RX2Q9UBL9 471 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 ZNF391Q9UJN7 358 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 HILPDAQ9Y5L2 63 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 KIAA2026Q5HYC2 2103 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 MYCBP2O75592 4640 aa3.17□□□□□ -1.9
VPS50-214ENST00000477935 A0A0B4J2E0 115 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 A0A1B0GX12 115 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 CD300LBA8K4G0 201 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 C17orf98A8MV24 154 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 LRRN3E7EW58 273 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 H0Y980 276 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.16□□□□□ -1.9
VPS50-214ENST00000477935 BHLHE40O14503 412 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 ARPC1BO15143 372 aaKnown RBP3.16□□□□□ -1.9
VPS50-214ENST00000477935 BRI3O95415 125 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 CPSF4O95639 269 aaKnown RBP3.16□□□□□ -1.9
VPS50-214ENST00000477935 IGHG2P01859 326 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 FGF4P08620 206 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 ASAH2BP0C7U1 165 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 LINC00032P0C843 101 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 ZCCHC18P0CG32 403 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 ATP6V1B1P15313 513 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 AREGP15514 252 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 HTR1DP28221 377 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 PHBP35232 272 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 UGT2B15P54855 530 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 NCALDP61601 193 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 LSM6P62312 80 aaKnown RBP3.16□□□□□ -1.9
VPS50-214ENST00000477935 HOXC5Q00444 222 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 CAV1Q03135 178 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 GABPB1Q06547 395 aaPredicted RBP3.16□□□□□ -1.9
VPS50-214ENST00000477935 CD47Q08722 323 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 LRRC74AQ0VAA2 488 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 DYNC1I2Q13409 638 aaKnown RBP3.16□□□□□ -1.9
VPS50-214ENST00000477935 AQP6Q13520 282 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 ENDOGQ14249 297 aaKnown RBP3.16□□□□□ -1.9
VPS50-214ENST00000477935 OR4F3Q6IEY1 312 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 LCN8Q6JVE9 175 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 NANOGP8Q6NSW7 305 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 C8orf74Q6P047 294 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 WDR82Q6UXN9 313 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 LINC00322Q6ZN03 302 aaPredicted RBP3.16□□□□□ -1.9
VPS50-214ENST00000477935 ACP7Q6ZNF0 438 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 RANBP3LQ86VV4 465 aaPredicted RBP3.16□□□□□ -1.9
VPS50-214ENST00000477935 LINC00518Q8N0U6 118 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 STPG2Q8N412 459 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 KRTCAP2Q8N6L1 136 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 CYB561A3Q8NBI2 242 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 OR10Z1Q8NGY1 313 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 ANGPTL6Q8NI99 470 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 TMEM106AQ96A25 262 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 CREB3L1Q96BA8 519 aa3.16□□□□□ -1.9
VPS50-214ENST00000477935 SLCO4A1Q96BD0 722 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms