RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 LOC110117498-PIK3R3F6TDL0 507 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 H3BN98 237 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 SIRPB1O00241 398 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 PRKYO43930 277 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 RAMP3O60896 148 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 CLIC3O95833 236 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 OR2H2O95918 312 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 PRKACGP22612 351 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 GABRR1P24046 479 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 EPHA2P29317 976 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 ERP29P30040 261 aaKnown RBP3.54□□□□□ -1.84
CKS1B-207ENST00000477676 BRS3P32247 399 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 RIDAP52758 137 aaKnown RBP3.54□□□□□ -1.84
CKS1B-207ENST00000477676 SNU13P55769 128 aaKnown RBP3.54□□□□□ -1.84
CKS1B-207ENST00000477676 RAB25P57735 213 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 ESRRGP62508 458 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 EFNB1P98172 346 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 AESQ08117 197 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 IL18R1Q13478 541 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 DCTN2Q13561 401 aaKnown RBP3.54□□□□□ -1.84
CKS1B-207ENST00000477676 HNF4GQ14541 408 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 ODF4Q2M2E3 257 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 SLC35D3Q5M8T2 416 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 Q6P435 159 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 GSG1LQ6UXU4 331 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 NR2C2APQ86WQ0 139 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 CATSPERDQ86XM0 798 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 DEFB107AQ8IZN7 70 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 PRSS35Q8N3Z0 413 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 STPG2Q8N412 459 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 DRAM1Q8N682 238 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 Q8N6K4 173 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 OR51D1Q8NGF3 324 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 TEX47Q8TBZ9 253 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 MYOZ3Q8TDC0 251 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 GIPC3Q8TF64 312 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 CHPT1Q8WUD6 406 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 NUDCD2Q8WVJ2 157 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 CAPSLQ8WWF8 208 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 EMG1Q92979 244 aaKnown RBP3.54□□□□□ -1.84
CKS1B-207ENST00000477676 STMN2Q93045 179 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 CMTM5Q96DZ9 223 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 ADAT3Q96EY9 351 aaPredicted RBP3.54□□□□□ -1.84
CKS1B-207ENST00000477676 EDA2RQ9HAV5 297 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 ADGRL4Q9HBW9 690 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 PLSCR3Q9NRY6 295 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 ZFP57Q9NU63 452 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF581Q9P0T4 197 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 ACTR3BQ9P1U1 418 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 SLC7A11Q9UPY5 501 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 R4GMQ9 66 aa3.54□□□□□ -1.84
CKS1B-207ENST00000477676 IGHV3-72A0A0B4J1Y9 119 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 TRAV39A0A0B4J263 110 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 TRBV2A0A0J9YWF9 115 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 A0A1W2PPE3 182 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 ODAMA1E959 279 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 DHRS7CA6NNS2 312 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 SERPINE3A8MV23 424 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF736B4DX44 427 aaPredicted RBP3.53□□□□□ -1.84
CKS1B-207ENST00000477676 M0QZK8 103 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 FGF16O43320 207 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 SNX3O60493 162 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF254O75437 659 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 GMNNO75496 209 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 B3GALNT1O75752 331 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 GAS8-AS1O95177 125 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 HCKP08631 526 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 LYL1P12980 280 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 PRKACAP17612 351 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 KIR3DL2P43630 455 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 CDX1P47902 265 aaPredicted RBP3.53□□□□□ -1.84
CKS1B-207ENST00000477676 FAM3BP58499 235 aaPredicted RBP3.53□□□□□ -1.84
CKS1B-207ENST00000477676 CXCR4P61073 352 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 RPL36AP83881 106 aaKnown RBP3.53□□□□□ -1.84
CKS1B-207ENST00000477676 EBI3Q14213 229 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 RBM39Q14498 530 aaKnown RBP3.53□□□□□ -1.84
CKS1B-207ENST00000477676 KIR2DS1Q14954 304 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 CDK5R1Q15078 307 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF829Q3KNS6 432 aaPredicted RBP3.53□□□□□ -1.84
CKS1B-207ENST00000477676 C9orf66Q5T8R8 295 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 BCL2L15Q5TBC7 163 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 LCN1P1Q5VSP4 162 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 KCTD18Q6PI47 426 aaPredicted RBP3.53□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF322Q6U7Q0 402 aaPredicted RBP3.53□□□□□ -1.84
CKS1B-207ENST00000477676 C16orf89Q6UX73 402 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 UNQ9370/PRO34162Q6UXP9 181 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 ZBTB49Q6ZSB9 765 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 TRAPPC6BQ86SZ2 158 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 RTN4RL2Q86UN3 420 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 RDH10Q8IZV5 341 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 FAM58AQ8N1B3 248 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 Q8N9W7 124 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 OR13A1Q8NGR1 328 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 OR10AC1Q8NH08 325 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 ZNF596Q8TC21 504 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 RFT1Q96AA3 541 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 CYYR1Q96J86 154 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 AKR1E2Q96JD6 320 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 SPACA5Q96QH8 159 aa3.53□□□□□ -1.84
CKS1B-207ENST00000477676 NR1H4Q96RI1 486 aaPredicted RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms